Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 AP001330.3-201ENST00000520123 633 ntBASIC15.78■□□□□ 0.12
HIST1H1AQ02539 AF213884.3-201ENST00000563833 479 ntBASIC15.78■□□□□ 0.12
HIST1H1AQ02539 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 AC009237.3-201ENST00000393279 1427 ntBASIC15.77■□□□□ 0.12
HIST1H1AQ02539 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
HIST1H1AQ02539 AC110285.6-201ENST00000617652 491 ntBASIC15.77■□□□□ 0.12
HIST1H1AQ02539 AL355001.2-201ENST00000620617 1191 ntBASIC15.77■□□□□ 0.12
HIST1H1AQ02539 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H1AQ02539 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 AL157384.1-201ENST00000445995 2473 ntBASIC15.76■□□□□ 0.11
HIST1H1AQ02539 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H1AQ02539 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H1AQ02539 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms