Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 SCRN2-213ENST00000584567 932 ntTSL 217.04■□□□□ 0.325e-7■■■□□ 15.5
LSM11P83369 SCRN2-208ENST00000581645 1477 ntTSL 516.97■□□□□ 0.315e-7■■■□□ 15.5
LSM11P83369 SCRN2-209ENST00000582459 1624 ntTSL 515.53■□□□□ 0.085e-7■■■□□ 15.5
LSM11P83369 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.34■□□□□ 0.055e-7■■■□□ 15.5
LSM11P83369 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.66■□□□□ 0.17e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.17□□□□□ -0.147e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-210ENST00000488338 533 ntTSL 313.1□□□□□ -0.317e-11■■■□□ 15.5
LSM11P83369 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.327e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.337e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-204ENST00000466498 371 ntTSL 212.85□□□□□ -0.357e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-208ENST00000474831 564 ntTSL 312.42□□□□□ -0.427e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-211ENST00000490633 401 ntTSL 312.21□□□□□ -0.457e-11■■■□□ 15.5
LSM11P83369 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.467e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.11□□□□□ -0.477e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.08□□□□□ -0.487e-11■■■□□ 15.5
LSM11P83369 PRG2-203ENST00000530105 1048 ntTSL 511.82□□□□□ -0.527e-11■■■□□ 15.5
LSM11P83369 PRG2-204ENST00000533605 1350 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.757e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-207ENST00000474141 519 ntTSL 2 BASIC9.78□□□□□ -0.847e-11■■■□□ 15.5
LSM11P83369 LAMTOR4-203ENST00000460732 616 ntTSL 3 BASIC9.03□□□□□ -0.967e-11■■■□□ 15.5
LSM11P83369 CCNL2-206ENST00000463260 1941 ntTSL 1 (best)13.74□□□□□ -0.213e-10■■■□□ 15.5
LSM11P83369 UBR4-205ENST00000417040 6175 ntTSL 510.73□□□□□ -0.691e-6■■■□□ 15.5
LSM11P83369 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC8.76□□□□□ -1.011e-8■■■□□ 15.5
LSM11P83369 WDR75-203ENST00000436347 2703 ntTSL 28.23□□□□□ -1.091e-8■■■□□ 15.5
LSM11P83369 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.111e-8■■■□□ 15.5
LSM11P83369 WDR75-202ENST00000427960 4297 ntTSL 1 (best)3.73□□□□□ -1.811e-8■■■□□ 15.5
LSM11P83369 AGAP3-214ENST00000476375 1019 ntTSL 511.97□□□□□ -0.493e-6■■■□□ 15.5
LSM11P83369 DAZAP1-204ENST00000586579 619 ntTSL 319.86■□□□□ 0.771e-7■■■□□ 15.4
LSM11P83369 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.141e-6■■■□□ 15.4
LSM11P83369 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.631e-6■■■□□ 15.4
LSM11P83369 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.651e-6■■■□□ 15.4
LSM11P83369 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.671e-6■■■□□ 15.4
LSM11P83369 SAT2-214ENST00000576846 1563 nt22.26■■□□□ 1.152e-7■■■□□ 15.4
LSM11P83369 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.88■■□□□ 1.092e-6■■■□□ 15.4
LSM11P83369 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 12e-6■■■□□ 15.4
LSM11P83369 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.912e-6■■■□□ 15.4
LSM11P83369 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.832e-6■■■□□ 15.4
LSM11P83369 SMAD5-202ENST00000507118 669 ntTSL 1 (best)19.98■□□□□ 0.792e-6■■■□□ 15.4
LSM11P83369 SMAD5-207ENST00000511116 847 ntTSL 1 (best)19.98■□□□□ 0.792e-6■■■□□ 15.4
LSM11P83369 UBALD1-207ENST00000591113 659 ntTSL 519.39■□□□□ 0.696e-9■■■□□ 15.4
LSM11P83369 GAB2-206ENST00000530915 567 ntTSL 419.39■□□□□ 0.692e-6■■■□□ 15.4
LSM11P83369 BICRA-202ENST00000594866 532 ntAPPRIS ALT2 TSL 219.28■□□□□ 0.682e-6■■■□□ 15.4
LSM11P83369 ARVCF-211ENST00000495096 2549 ntTSL 218.17■□□□□ 0.51e-6■■■□□ 15.4
LSM11P83369 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.91■□□□□ 0.462e-6■■■□□ 15.4
LSM11P83369 WARS-207ENST00000553524 707 ntTSL 317.87■□□□□ 0.452e-6■■■□□ 15.4
LSM11P83369 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.82■□□□□ 0.442e-6■■■□□ 15.4
LSM11P83369 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.412e-6■■■□□ 15.4
LSM11P83369 GAB2-203ENST00000526030 650 ntTSL 317.56■□□□□ 0.42e-6■■■□□ 15.4
LSM11P83369 GAB2-207ENST00000534823 568 ntTSL 317.39■□□□□ 0.372e-6■■■□□ 15.4
LSM11P83369 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.11■□□□□ 0.332e-6■■■□□ 15.4
LSM11P83369 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.272e-6■■■□□ 15.4
LSM11P83369 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.272e-6■■■□□ 15.4
LSM11P83369 WARS-218ENST00000554772 562 ntTSL 316.51■□□□□ 0.232e-6■■■□□ 15.4
LSM11P83369 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.226e-9■■■□□ 15.4
LSM11P83369 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.38■□□□□ 0.212e-6■■■□□ 15.4
LSM11P83369 UBALD1-205ENST00000590891 2641 ntBASIC16.19■□□□□ 0.186e-9■■■□□ 15.4
LSM11P83369 ACADM-211ENST00000528016 546 ntTSL 416.04■□□□□ 0.162e-6■■■□□ 15.4
LSM11P83369 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.93■□□□□ 0.146e-9■■■□□ 15.4
LSM11P83369 LMBR1L-205ENST00000547670 1866 ntTSL 1 (best)15.9■□□□□ 0.142e-6■■■□□ 15.4
LSM11P83369 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.7■□□□□ 0.14e-46■■■□□ 15.4
LSM11P83369 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.12e-6■■■□□ 15.4
LSM11P83369 RRBP1-207ENST00000468428 2200 ntTSL 215.63■□□□□ 0.094e-46■■■□□ 15.4
LSM11P83369 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.076e-9■■■□□ 15.4
LSM11P83369 HACE1-204ENST00000416605 4729 ntTSL 1 (best)15.52■□□□□ 0.072e-6■■■□□ 15.4
LSM11P83369 ZNF767P-204ENST00000486492 1616 ntTSL 215.5■□□□□ 0.072e-6■■■□□ 15.4
LSM11P83369 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.36■□□□□ 0.051e-11■■■□□ 15.4
LSM11P83369 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.27■□□□□ 0.042e-6■■■□□ 15.4
LSM11P83369 YY1AP1-207ENST00000361140 2701 ntTSL 1 (best)15.24■□□□□ 0.032e-6■■■□□ 15.4
LSM11P83369 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.08■□□□□ 0.012e-6■■■□□ 15.4
LSM11P83369 WARS-239ENST00000557239 471 ntTSL 414.99□□□□□ -0.012e-6■■■□□ 15.4
LSM11P83369 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.012e-6■■■□□ 15.4
LSM11P83369 NCOA1-207ENST00000469850 537 ntTSL 514.92□□□□□ -0.026e-9■■■□□ 15.4
LSM11P83369 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.032e-6■■■□□ 15.4
LSM11P83369 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.042e-6■■■□□ 15.4
LSM11P83369 WARS-236ENST00000556783 567 ntTSL 514.78□□□□□ -0.042e-6■■■□□ 15.4
LSM11P83369 WARS-214ENST00000554331 831 ntTSL 214.78□□□□□ -0.042e-6■■■□□ 15.4
LSM11P83369 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.062e-6■■■□□ 15.4
LSM11P83369 YY1AP1-218ENST00000454523 810 ntAPPRIS ALT2 TSL 214.62□□□□□ -0.072e-6■■■□□ 15.4
LSM11P83369 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.081e-6■■■□□ 15.4
LSM11P83369 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.52□□□□□ -0.092e-6■■■□□ 15.4
LSM11P83369 NCOA1-211ENST00000496333 501 ntTSL 314.48□□□□□ -0.096e-9■■■□□ 15.4
LSM11P83369 WARS-206ENST00000553413 568 ntTSL 514.46□□□□□ -0.092e-6■■■□□ 15.4
LSM11P83369 WARS-243ENST00000557722 848 ntTSL 514.46□□□□□ -0.092e-6■■■□□ 15.4
LSM11P83369 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.12e-6■■■□□ 15.4
LSM11P83369 HELLS-207ENST00000419900 711 ntTSL 314.34□□□□□ -0.112e-6■■■□□ 15.4
LSM11P83369 WDR82-203ENST00000469000 587 ntTSL 514.24□□□□□ -0.132e-6■■■□□ 15.4
LSM11P83369 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.136e-9■■■□□ 15.4
LSM11P83369 PPM1D-202ENST00000392995 2996 ntTSL 214.19□□□□□ -0.142e-6■■■□□ 15.4
LSM11P83369 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.164e-46■■■□□ 15.4
LSM11P83369 NABP1-201ENST00000307834 1914 ntTSL 314.03□□□□□ -0.161e-11■■■□□ 15.4
LSM11P83369 PPFIA4-205ENST00000486360 4547 ntTSL 214.01□□□□□ -0.172e-6■■■□□ 15.4
LSM11P83369 YY1AP1-217ENST00000443231 932 ntAPPRIS ALT2 TSL 313.97□□□□□ -0.172e-6■■■□□ 15.4
LSM11P83369 ZNF267-204ENST00000562971 567 ntTSL 413.9□□□□□ -0.182e-6■■■□□ 15.4
LSM11P83369 TMEM106B-203ENST00000420833 1492 ntTSL 1 (best)13.82□□□□□ -0.22e-6■■■□□ 15.4
LSM11P83369 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.55□□□□□ -0.242e-6■■■□□ 15.4
LSM11P83369 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.262e-6■■■□□ 15.4
LSM11P83369 SMAD5-205ENST00000509297 854 ntTSL 1 (best)13.41□□□□□ -0.262e-6■■■□□ 15.4
LSM11P83369 YY1AP1-221ENST00000476093 1037 ntTSL 313.36□□□□□ -0.272e-6■■■□□ 15.4
LSM11P83369 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.282e-6■■■□□ 15.4
LSM11P83369 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.27□□□□□ -0.292e-6■■■□□ 15.4
LSM11P83369 DAP-203ENST00000508253 785 ntTSL 213.26□□□□□ -0.296e-9■■■□□ 15.4
Retrieved 100 of 11,495 protein–RNA pairs in 100 ms