Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 AC034268.1-201ENST00000441047 882 ntBASIC18.11■□□□□ 0.49
HIST1H3AP68431 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
HIST1H3AP68431 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIST1H3AP68431 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIST1H3AP68431 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HIST1H3AP68431 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HIST1H3AP68431 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIST1H3AP68431 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIST1H3AP68431 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIST1H3AP68431 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIST1H3AP68431 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIST1H3AP68431 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.1■□□□□ 0.49
HIST1H3AP68431 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.1■□□□□ 0.49
HIST1H3AP68431 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.1■□□□□ 0.49
HIST1H3AP68431 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.1■□□□□ 0.49
HIST1H3AP68431 AC243732.1-201ENST00000612648 864 ntBASIC18.1■□□□□ 0.49
HIST1H3AP68431 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HIST1H3AP68431 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIST1H3AP68431 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.1■□□□□ 0.49
HIST1H3AP68431 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HIST1H3AP68431 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.09■□□□□ 0.49
HIST1H3AP68431 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIST1H3AP68431 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HIST1H3AP68431 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
HIST1H3AP68431 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.08■□□□□ 0.49
HIST1H3AP68431 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
HIST1H3AP68431 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HIST1H3AP68431 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.08■□□□□ 0.49
HIST1H3AP68431 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
HIST1H3AP68431 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.08■□□□□ 0.49
HIST1H3AP68431 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HIST1H3AP68431 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HIST1H3AP68431 AC019069.1-201ENST00000610008 1333 ntBASIC18.08■□□□□ 0.49
HIST1H3AP68431 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.08■□□□□ 0.48
HIST1H3AP68431 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.08■□□□□ 0.48
HIST1H3AP68431 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.08■□□□□ 0.48
HIST1H3AP68431 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.08■□□□□ 0.48
HIST1H3AP68431 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.08■□□□□ 0.48
HIST1H3AP68431 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HIST1H3AP68431 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.08■□□□□ 0.48
HIST1H3AP68431 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HIST1H3AP68431 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HIST1H3AP68431 RBM17P2-201ENST00000616397 1405 ntBASIC18.07■□□□□ 0.48
HIST1H3AP68431 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HIST1H3AP68431 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms