Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.72■□□□□ 0.59
RPS4XP62701 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 ID1-201ENST00000376105 1233 ntBASIC18.72■□□□□ 0.59
RPS4XP62701 AC016769.1-201ENST00000409132 1010 ntBASIC18.72■□□□□ 0.59
RPS4XP62701 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPS4XP62701 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.72■□□□□ 0.59
RPS4XP62701 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4XP62701 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4XP62701 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPS4XP62701 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPS4XP62701 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4XP62701 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RPS4XP62701 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RPS4XP62701 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS4XP62701 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RPS4XP62701 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4XP62701 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.71■□□□□ 0.59
RPS4XP62701 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.71■□□□□ 0.59
RPS4XP62701 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.71■□□□□ 0.59
RPS4XP62701 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4XP62701 LINC01006-201ENST00000333319 2292 ntBASIC18.71■□□□□ 0.59
RPS4XP62701 AC073130.3-201ENST00000624389 2278 ntBASIC18.71■□□□□ 0.59
RPS4XP62701 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 AP005212.1-201ENST00000581547 1997 ntBASIC18.7■□□□□ 0.58
RPS4XP62701 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4XP62701 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.7■□□□□ 0.58
RPS4XP62701 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.7■□□□□ 0.58
RPS4XP62701 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.7■□□□□ 0.58
RPS4XP62701 POU5F1P4-201ENST00000413175 1085 ntBASIC18.7■□□□□ 0.58
RPS4XP62701 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.7■□□□□ 0.58
RPS4XP62701 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4XP62701 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4XP62701 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.7■□□□□ 0.58
RPS4XP62701 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4XP62701 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RPS4XP62701 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPS4XP62701 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4XP62701 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RPS4XP62701 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RPS4XP62701 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RPS4XP62701 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4XP62701 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS4XP62701 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RPS4XP62701 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4XP62701 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RPS4XP62701 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.69■□□□□ 0.58
RPS4XP62701 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4XP62701 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.69■□□□□ 0.58
RPS4XP62701 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS4XP62701 AC137761.2-201ENST00000561729 223 ntBASIC18.69■□□□□ 0.58
RPS4XP62701 AC145350.3-201ENST00000569033 163 ntBASIC18.69■□□□□ 0.58
RPS4XP62701 AC138907.5-202ENST00000569484 235 ntBASIC18.69■□□□□ 0.58
RPS4XP62701 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4XP62701 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4XP62701 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS4XP62701 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4XP62701 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4XP62701 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4XP62701 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.68■□□□□ 0.58
RPS4XP62701 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RPS4XP62701 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS4XP62701 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.68■□□□□ 0.58
RPS4XP62701 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS4XP62701 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4XP62701 AC008175.2-201ENST00000612840 297 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms