Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.72□□□□□ -0.05
UBE2D3P61077 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.72□□□□□ -0.05
UBE2D3P61077 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.72□□□□□ -0.05
UBE2D3P61077 AL355001.2-201ENST00000620617 1191 ntBASIC14.72□□□□□ -0.05
UBE2D3P61077 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2D3P61077 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2D3P61077 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2D3P61077 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2D3P61077 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2D3P61077 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2D3P61077 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.72□□□□□ -0.05
UBE2D3P61077 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2D3P61077 RASA4CP-201ENST00000424092 1398 ntBASIC14.72□□□□□ -0.05
UBE2D3P61077 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
UBE2D3P61077 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2D3P61077 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
UBE2D3P61077 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBE2D3P61077 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
UBE2D3P61077 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBE2D3P61077 LINC01006-201ENST00000333319 2292 ntBASIC14.71□□□□□ -0.05
UBE2D3P61077 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBE2D3P61077 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
UBE2D3P61077 MIR572-201ENST00000384983 95 ntBASIC14.71□□□□□ -0.05
UBE2D3P61077 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.71□□□□□ -0.05
UBE2D3P61077 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.71□□□□□ -0.05
UBE2D3P61077 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.71□□□□□ -0.05
UBE2D3P61077 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.71□□□□□ -0.05
UBE2D3P61077 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.71□□□□□ -0.05
UBE2D3P61077 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
UBE2D3P61077 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.71□□□□□ -0.05
UBE2D3P61077 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
UBE2D3P61077 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
UBE2D3P61077 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UBE2D3P61077 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UBE2D3P61077 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UBE2D3P61077 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.7□□□□□ -0.06
UBE2D3P61077 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.7□□□□□ -0.06
UBE2D3P61077 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.7□□□□□ -0.06
UBE2D3P61077 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
UBE2D3P61077 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
UBE2D3P61077 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.7□□□□□ -0.06
UBE2D3P61077 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.7□□□□□ -0.06
UBE2D3P61077 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.7□□□□□ -0.06
UBE2D3P61077 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.7□□□□□ -0.06
UBE2D3P61077 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
UBE2D3P61077 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
UBE2D3P61077 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.7□□□□□ -0.06
UBE2D3P61077 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2D3P61077 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
UBE2D3P61077 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
UBE2D3P61077 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.69□□□□□ -0.06
UBE2D3P61077 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.69□□□□□ -0.06
UBE2D3P61077 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.69□□□□□ -0.06
UBE2D3P61077 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.69□□□□□ -0.06
UBE2D3P61077 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UBE2D3P61077 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
UBE2D3P61077 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.69□□□□□ -0.06
UBE2D3P61077 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
UBE2D3P61077 MIR939-201ENST00000401314 82 ntBASIC14.69□□□□□ -0.06
UBE2D3P61077 AF213884.3-201ENST00000563833 479 ntBASIC14.69□□□□□ -0.06
UBE2D3P61077 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.69□□□□□ -0.06
UBE2D3P61077 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
UBE2D3P61077 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.69□□□□□ -0.06
UBE2D3P61077 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.69□□□□□ -0.06
UBE2D3P61077 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.69□□□□□ -0.06
UBE2D3P61077 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
UBE2D3P61077 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UBE2D3P61077 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
UBE2D3P61077 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
UBE2D3P61077 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.69□□□□□ -0.06
UBE2D3P61077 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBE2D3P61077 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.69□□□□□ -0.06
UBE2D3P61077 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D3P61077 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D3P61077 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D3P61077 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBE2D3P61077 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.68□□□□□ -0.06
UBE2D3P61077 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms