Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXG1P55316 AL591742.1-201ENST00000604433 565 ntBASIC18.23■□□□□ 0.51
FOXG1P55316 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXG1P55316 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXG1P55316 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
FOXG1P55316 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXG1P55316 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXG1P55316 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXG1P55316 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXG1P55316 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXG1P55316 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXG1P55316 ID1-201ENST00000376105 1233 ntBASIC18.22■□□□□ 0.51
FOXG1P55316 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXG1P55316 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXG1P55316 AC093787.1-201ENST00000450396 207 ntBASIC18.22■□□□□ 0.51
FOXG1P55316 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
FOXG1P55316 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXG1P55316 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXG1P55316 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
FOXG1P55316 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXG1P55316 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXG1P55316 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXG1P55316 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FOXG1P55316 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FOXG1P55316 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
FOXG1P55316 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXG1P55316 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXG1P55316 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
FOXG1P55316 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
FOXG1P55316 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 AC104771.1-201ENST00000603335 964 ntBASIC18.21■□□□□ 0.51
FOXG1P55316 AL121832.2-201ENST00000610979 668 ntBASIC18.21■□□□□ 0.51
FOXG1P55316 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 AL137060.1-201ENST00000618151 2648 ntBASIC18.21■□□□□ 0.51
FOXG1P55316 AL049796.1-201ENST00000565336 1766 ntBASIC18.21■□□□□ 0.51
FOXG1P55316 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.21■□□□□ 0.51
FOXG1P55316 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXG1P55316 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.21■□□□□ 0.5
FOXG1P55316 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
FOXG1P55316 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXG1P55316 GPX1P1-201ENST00000388829 606 ntBASIC18.2■□□□□ 0.5
FOXG1P55316 GUSBP6-202ENST00000438529 1198 ntBASIC18.2■□□□□ 0.5
FOXG1P55316 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXG1P55316 AC105036.2-201ENST00000569468 176 ntBASIC18.2■□□□□ 0.5
FOXG1P55316 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
FOXG1P55316 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
FOXG1P55316 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXG1P55316 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXG1P55316 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXG1P55316 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXG1P55316 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXG1P55316 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXG1P55316 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FOXG1P55316 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXG1P55316 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXG1P55316 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXG1P55316 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXG1P55316 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXG1P55316 AF201337.1-201ENST00000520239 748 ntBASIC18.19■□□□□ 0.5
FOXG1P55316 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXG1P55316 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FOXG1P55316 AL109923.1-201ENST00000618799 583 ntBASIC18.19■□□□□ 0.5
FOXG1P55316 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXG1P55316 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXG1P55316 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXG1P55316 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXG1P55316 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXG1P55316 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FOXG1P55316 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXG1P55316 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
FOXG1P55316 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXG1P55316 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXG1P55316 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXG1P55316 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXG1P55316 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXG1P55316 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXG1P55316 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXG1P55316 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FOXG1P55316 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXG1P55316 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.18■□□□□ 0.5
FOXG1P55316 RARRES2P4-201ENST00000514074 484 ntBASIC18.18■□□□□ 0.5
FOXG1P55316 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
FOXG1P55316 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXG1P55316 AC133552.2-202ENST00000575694 574 ntBASIC18.18■□□□□ 0.5
FOXG1P55316 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
FOXG1P55316 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXG1P55316 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXG1P55316 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FOXG1P55316 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXG1P55316 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
FOXG1P55316 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXG1P55316 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXG1P55316 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms