Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC25A1P53007 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC25A1P53007 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
SLC25A1P53007 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SLC25A1P53007 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC25A1P53007 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC25A1P53007 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC25A1P53007 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC25A1P53007 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC25A1P53007 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 KRT87P-202ENST00000534226 1464 ntBASIC18.42■□□□□ 0.54
SLC25A1P53007 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC25A1P53007 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC25A1P53007 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC25A1P53007 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC25A1P53007 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC25A1P53007 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC25A1P53007 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC25A1P53007 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC25A1P53007 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC25A1P53007 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC25A1P53007 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SLC25A1P53007 FP700111.2-201ENST00000619190 1892 ntBASIC18.41■□□□□ 0.54
SLC25A1P53007 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC25A1P53007 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC25A1P53007 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC25A1P53007 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC25A1P53007 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC25A1P53007 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC25A1P53007 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC25A1P53007 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC25A1P53007 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC25A1P53007 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC25A1P53007 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC25A1P53007 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC25A1P53007 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC25A1P53007 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC25A1P53007 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 AC079140.4-201ENST00000507448 529 ntBASIC18.4■□□□□ 0.54
SLC25A1P53007 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC25A1P53007 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SLC25A1P53007 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC25A1P53007 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SLC25A1P53007 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC25A1P53007 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC25A1P53007 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
SLC25A1P53007 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.39■□□□□ 0.54
SLC25A1P53007 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SLC25A1P53007 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC25A1P53007 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC25A1P53007 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC25A1P53007 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC25A1P53007 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC25A1P53007 AC138907.5-202ENST00000569484 235 ntBASIC18.39■□□□□ 0.53
SLC25A1P53007 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SLC25A1P53007 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SLC25A1P53007 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SLC25A1P53007 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC25A1P53007 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SLC25A1P53007 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 AL162377.1-201ENST00000618844 1793 ntBASIC18.38■□□□□ 0.53
SLC25A1P53007 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC25A1P53007 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC25A1P53007 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.38■□□□□ 0.53
SLC25A1P53007 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC25A1P53007 AL139246.5-201ENST00000606645 996 ntBASIC18.38■□□□□ 0.53
SLC25A1P53007 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC25A1P53007 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms