Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
USP11P51784 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.52■■□□□ 1.36
USP11P51784 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
USP11P51784 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
USP11P51784 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.51■■□□□ 1.35
USP11P51784 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
USP11P51784 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
USP11P51784 CYP2T1P-201ENST00000432607 1285 ntBASIC23.51■■□□□ 1.35
USP11P51784 AC006970.2-201ENST00000450065 779 ntBASIC23.51■■□□□ 1.35
USP11P51784 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.51■■□□□ 1.35
USP11P51784 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.51■■□□□ 1.35
USP11P51784 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
USP11P51784 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
USP11P51784 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
USP11P51784 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
USP11P51784 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
USP11P51784 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP11P51784 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP11P51784 AC007322.3-201ENST00000426526 701 ntBASIC23.5■■□□□ 1.35
USP11P51784 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.5■■□□□ 1.35
USP11P51784 NCF1B-203ENST00000435988 1254 ntBASIC23.5■■□□□ 1.35
USP11P51784 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.5■■□□□ 1.35
USP11P51784 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.5■■□□□ 1.35
USP11P51784 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP11P51784 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
USP11P51784 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.5■■□□□ 1.35
USP11P51784 RARRES2P4-201ENST00000514074 484 ntBASIC23.5■■□□□ 1.35
USP11P51784 AC016405.3-201ENST00000607710 860 ntBASIC23.5■■□□□ 1.35
USP11P51784 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP11P51784 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
USP11P51784 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP11P51784 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
USP11P51784 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
USP11P51784 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP11P51784 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
USP11P51784 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
USP11P51784 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
USP11P51784 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP11P51784 AL512625.2-201ENST00000417533 625 ntBASIC23.49■■□□□ 1.35
USP11P51784 AC069236.1-201ENST00000604339 616 ntBASIC23.49■■□□□ 1.35
USP11P51784 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP11P51784 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.49■■□□□ 1.35
USP11P51784 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP11P51784 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
USP11P51784 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.49■■□□□ 1.35
USP11P51784 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.49■■□□□ 1.35
USP11P51784 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
USP11P51784 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.48■■□□□ 1.35
USP11P51784 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
USP11P51784 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
USP11P51784 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
USP11P51784 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.48■■□□□ 1.35
USP11P51784 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.48■■□□□ 1.35
USP11P51784 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.48■■□□□ 1.35
USP11P51784 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.48■■□□□ 1.35
USP11P51784 AC008694.1-202ENST00000636953 945 ntBASIC23.48■■□□□ 1.35
USP11P51784 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
USP11P51784 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
USP11P51784 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
USP11P51784 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
USP11P51784 AC011484.1-201ENST00000377652 1995 ntBASIC23.47■■□□□ 1.35
USP11P51784 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
USP11P51784 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
USP11P51784 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.47■■□□□ 1.35
USP11P51784 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.47■■□□□ 1.35
USP11P51784 AF106564.1-201ENST00000607058 2553 ntBASIC23.47■■□□□ 1.35
USP11P51784 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
USP11P51784 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.47■■□□□ 1.35
USP11P51784 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
USP11P51784 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
USP11P51784 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.47■■□□□ 1.35
USP11P51784 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
USP11P51784 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
USP11P51784 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
USP11P51784 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
USP11P51784 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
USP11P51784 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.46■■□□□ 1.35
USP11P51784 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.46■■□□□ 1.35
USP11P51784 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
USP11P51784 AC083906.2-201ENST00000511578 360 ntBASIC23.46■■□□□ 1.35
USP11P51784 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.46■■□□□ 1.35
USP11P51784 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.46■■□□□ 1.35
USP11P51784 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.46■■□□□ 1.35
USP11P51784 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
USP11P51784 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
USP11P51784 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
USP11P51784 AL121832.2-201ENST00000610979 668 ntBASIC23.46■■□□□ 1.35
USP11P51784 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.46■■□□□ 1.35
USP11P51784 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
USP11P51784 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
USP11P51784 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
USP11P51784 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
USP11P51784 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.34
USP11P51784 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
USP11P51784 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.45■■□□□ 1.34
USP11P51784 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
USP11P51784 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.45■■□□□ 1.34
USP11P51784 AF201337.1-201ENST00000520239 748 ntBASIC23.45■■□□□ 1.34
USP11P51784 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.45■■□□□ 1.34
USP11P51784 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms