Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LHX2P50458 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.58■□□□□ 0.56
LHX2P50458 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LHX2P50458 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LHX2P50458 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.58■□□□□ 0.56
LHX2P50458 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LHX2P50458 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LHX2P50458 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.57■□□□□ 0.56
LHX2P50458 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.57■□□□□ 0.56
LHX2P50458 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.57■□□□□ 0.56
LHX2P50458 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.57■□□□□ 0.56
LHX2P50458 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LHX2P50458 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.57■□□□□ 0.56
LHX2P50458 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.57■□□□□ 0.56
LHX2P50458 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.57■□□□□ 0.56
LHX2P50458 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
LHX2P50458 AC133041.1-202ENST00000642053 222 ntBASIC18.57■□□□□ 0.56
LHX2P50458 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LHX2P50458 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LHX2P50458 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LHX2P50458 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.57■□□□□ 0.56
LHX2P50458 AC079834.2-201ENST00000609776 1949 ntBASIC18.57■□□□□ 0.56
LHX2P50458 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX2P50458 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX2P50458 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LHX2P50458 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LHX2P50458 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX2P50458 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX2P50458 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX2P50458 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.56■□□□□ 0.56
LHX2P50458 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX2P50458 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX2P50458 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.56■□□□□ 0.56
LHX2P50458 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.56■□□□□ 0.56
LHX2P50458 AC092118.2-201ENST00000613495 667 ntBASIC18.56■□□□□ 0.56
LHX2P50458 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LHX2P50458 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX2P50458 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LHX2P50458 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.56■□□□□ 0.56
LHX2P50458 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LHX2P50458 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LHX2P50458 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LHX2P50458 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.55■□□□□ 0.56
LHX2P50458 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 LINC00565-201ENST00000562710 2331 ntBASIC18.55■□□□□ 0.56
LHX2P50458 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LHX2P50458 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LHX2P50458 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.55■□□□□ 0.56
LHX2P50458 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.55■□□□□ 0.56
LHX2P50458 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.55■□□□□ 0.56
LHX2P50458 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.55■□□□□ 0.56
LHX2P50458 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.55■□□□□ 0.56
LHX2P50458 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.55■□□□□ 0.56
LHX2P50458 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LHX2P50458 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX2P50458 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX2P50458 CLDN5-201ENST00000403084 2357 ntBASIC18.54■□□□□ 0.56
LHX2P50458 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LHX2P50458 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LHX2P50458 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LHX2P50458 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX2P50458 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.54■□□□□ 0.56
LHX2P50458 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.54■□□□□ 0.56
LHX2P50458 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX2P50458 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LHX2P50458 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LHX2P50458 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.54■□□□□ 0.56
LHX2P50458 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LHX2P50458 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LHX2P50458 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LHX2P50458 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.53■□□□□ 0.56
LHX2P50458 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LHX2P50458 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.53■□□□□ 0.56
LHX2P50458 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LHX2P50458 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LHX2P50458 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.53■□□□□ 0.56
LHX2P50458 AL355472.2-201ENST00000422958 438 ntBASIC18.53■□□□□ 0.56
LHX2P50458 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LHX2P50458 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.53■□□□□ 0.56
LHX2P50458 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.53■□□□□ 0.56
LHX2P50458 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.53■□□□□ 0.56
LHX2P50458 CYP2T3P-201ENST00000601990 817 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms