Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.42□□□□□ -0.1
PCP4P48539 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
PCP4P48539 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.42□□□□□ -0.1
PCP4P48539 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.42□□□□□ -0.1
PCP4P48539 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
PCP4P48539 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.42□□□□□ -0.1
PCP4P48539 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PCP4P48539 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PCP4P48539 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.42□□□□□ -0.1
PCP4P48539 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCP4P48539 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.41□□□□□ -0.1
PCP4P48539 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PCP4P48539 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCP4P48539 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 PKD1P1-201ENST00000458669 6805 ntBASIC14.41□□□□□ -0.1
PCP4P48539 AC079598.2-202ENST00000546624 1451 ntBASIC14.41□□□□□ -0.1
PCP4P48539 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC14.41□□□□□ -0.1
PCP4P48539 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 AC116562.4-201ENST00000641316 2276 ntBASIC14.41□□□□□ -0.1
PCP4P48539 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCP4P48539 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCP4P48539 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.41□□□□□ -0.1
PCP4P48539 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.4□□□□□ -0.1
PCP4P48539 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 FEM1AP1-201ENST00000431297 1995 ntBASIC14.4□□□□□ -0.1
PCP4P48539 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 LINC01960-201ENST00000563759 1884 ntBASIC14.4□□□□□ -0.1
PCP4P48539 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.4□□□□□ -0.1
PCP4P48539 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PCP4P48539 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCP4P48539 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCP4P48539 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCP4P48539 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
PCP4P48539 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
PCP4P48539 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.39□□□□□ -0.11
PCP4P48539 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PCP4P48539 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCP4P48539 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PCP4P48539 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
PCP4P48539 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.39□□□□□ -0.11
PCP4P48539 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.39□□□□□ -0.11
PCP4P48539 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.39□□□□□ -0.11
PCP4P48539 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCP4P48539 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 AL122018.1-201ENST00000446607 2310 ntBASIC14.38□□□□□ -0.11
PCP4P48539 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
PCP4P48539 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.38□□□□□ -0.11
PCP4P48539 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCP4P48539 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms