Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.51■□□□□ 0.55
CDKN2AP42771 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDKN2AP42771 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDKN2AP42771 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDKN2AP42771 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDKN2AP42771 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.5■□□□□ 0.55
CDKN2AP42771 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2AP42771 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2AP42771 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2AP42771 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2AP42771 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2AP42771 AC011484.1-201ENST00000377652 1995 ntBASIC18.5■□□□□ 0.55
CDKN2AP42771 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CDKN2AP42771 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2AP42771 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDKN2AP42771 POU5F1P4-201ENST00000413175 1085 ntBASIC18.5■□□□□ 0.55
CDKN2AP42771 AC008175.2-201ENST00000612840 297 ntBASIC18.5■□□□□ 0.55
CDKN2AP42771 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2AP42771 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKN2AP42771 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKN2AP42771 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CDKN2AP42771 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDKN2AP42771 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 AC027612.3-201ENST00000413684 1047 ntBASIC18.49■□□□□ 0.55
CDKN2AP42771 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.49■□□□□ 0.55
CDKN2AP42771 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKN2AP42771 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKN2AP42771 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKN2AP42771 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKN2AP42771 FP700111.2-201ENST00000619190 1892 ntBASIC18.49■□□□□ 0.55
CDKN2AP42771 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.49■□□□□ 0.55
CDKN2AP42771 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDKN2AP42771 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDKN2AP42771 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKN2AP42771 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDKN2AP42771 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKN2AP42771 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDKN2AP42771 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2AP42771 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.48■□□□□ 0.55
CDKN2AP42771 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2AP42771 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2AP42771 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2AP42771 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2AP42771 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2AP42771 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2AP42771 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKN2AP42771 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKN2AP42771 AC138907.5-202ENST00000569484 235 ntBASIC18.48■□□□□ 0.55
CDKN2AP42771 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDKN2AP42771 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKN2AP42771 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDKN2AP42771 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKN2AP42771 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2AP42771 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDKN2AP42771 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKN2AP42771 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2AP42771 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2AP42771 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKN2AP42771 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CDKN2AP42771 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2AP42771 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKN2AP42771 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2AP42771 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKN2AP42771 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKN2AP42771 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CDKN2AP42771 MIR638-201ENST00000385237 100 ntBASIC18.47■□□□□ 0.55
CDKN2AP42771 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2AP42771 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.47■□□□□ 0.55
CDKN2AP42771 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2AP42771 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2AP42771 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDKN2AP42771 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKN2AP42771 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDKN2AP42771 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
CDKN2AP42771 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CDKN2AP42771 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2AP42771 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.46■□□□□ 0.55
CDKN2AP42771 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDKN2AP42771 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDKN2AP42771 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms