Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.67■□□□□ 0.74
PTPN6P29350 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTPN6P29350 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN6P29350 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN6P29350 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PTPN6P29350 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN6P29350 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN6P29350 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTPN6P29350 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTPN6P29350 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN6P29350 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN6P29350 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN6P29350 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
PTPN6P29350 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN6P29350 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN6P29350 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTPN6P29350 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPN6P29350 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN6P29350 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
PTPN6P29350 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPN6P29350 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN6P29350 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN6P29350 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN6P29350 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN6P29350 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTPN6P29350 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTPN6P29350 AC007225.1-201ENST00000566331 1836 ntBASIC19.65■□□□□ 0.74
PTPN6P29350 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPN6P29350 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN6P29350 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN6P29350 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPN6P29350 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN6P29350 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.65■□□□□ 0.74
PTPN6P29350 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN6P29350 DUX4L2-201ENST00000561772 1275 ntBASIC19.65■□□□□ 0.74
PTPN6P29350 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN6P29350 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.65■□□□□ 0.74
PTPN6P29350 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
PTPN6P29350 DUX4L6-201ENST00000626483 1275 ntBASIC19.65■□□□□ 0.74
PTPN6P29350 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN6P29350 DUX4L1-201ENST00000627662 1275 ntBASIC19.65■□□□□ 0.74
PTPN6P29350 DUX4L8-201ENST00000629013 1275 ntBASIC19.65■□□□□ 0.74
PTPN6P29350 DUX4L3-201ENST00000630187 1275 ntBASIC19.65■□□□□ 0.74
PTPN6P29350 DUX4L7-201ENST00000630678 1275 ntBASIC19.65■□□□□ 0.74
PTPN6P29350 DUX4L5-201ENST00000630834 1275 ntBASIC19.65■□□□□ 0.74
PTPN6P29350 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PTPN6P29350 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN6P29350 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN6P29350 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN6P29350 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPN6P29350 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN6P29350 PKD1P6-201ENST00000343738 4769 ntBASIC19.64■□□□□ 0.73
PTPN6P29350 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN6P29350 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PTPN6P29350 AL162430.1-201ENST00000480705 870 ntBASIC19.64■□□□□ 0.73
PTPN6P29350 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN6P29350 EEF1DP3-203ENST00000566025 782 ntBASIC19.64■□□□□ 0.73
PTPN6P29350 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN6P29350 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN6P29350 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.64■□□□□ 0.73
PTPN6P29350 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN6P29350 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN6P29350 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN6P29350 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
PTPN6P29350 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN6P29350 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.64■□□□□ 0.73
PTPN6P29350 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN6P29350 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN6P29350 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN6P29350 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTPN6P29350 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN6P29350 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN6P29350 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN6P29350 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN6P29350 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN6P29350 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN6P29350 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN6P29350 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTPN6P29350 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN6P29350 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN6P29350 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.63■□□□□ 0.73
PTPN6P29350 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN6P29350 KRT18P14-201ENST00000534205 1250 ntBASIC19.63■□□□□ 0.73
PTPN6P29350 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PTPN6P29350 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN6P29350 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTPN6P29350 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN6P29350 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN6P29350 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN6P29350 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
PTPN6P29350 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN6P29350 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.62■□□□□ 0.73
PTPN6P29350 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN6P29350 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms