Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.97■□□□□ 0.47
ACKR3P25106 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.97■□□□□ 0.47
ACKR3P25106 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ACKR3P25106 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACKR3P25106 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.97■□□□□ 0.47
ACKR3P25106 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ACKR3P25106 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.97■□□□□ 0.47
ACKR3P25106 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACKR3P25106 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ACKR3P25106 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ACKR3P25106 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
ACKR3P25106 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.96■□□□□ 0.47
ACKR3P25106 ZNRF2P3-201ENST00000424200 374 ntBASIC17.96■□□□□ 0.47
ACKR3P25106 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.96■□□□□ 0.47
ACKR3P25106 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.96■□□□□ 0.47
ACKR3P25106 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ACKR3P25106 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.96■□□□□ 0.47
ACKR3P25106 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ACKR3P25106 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ACKR3P25106 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
ACKR3P25106 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ACKR3P25106 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.95■□□□□ 0.46
ACKR3P25106 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.95■□□□□ 0.46
ACKR3P25106 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 AC006128.1-201ENST00000624704 1661 ntBASIC17.95■□□□□ 0.46
ACKR3P25106 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ACKR3P25106 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ACKR3P25106 AP004607.4-201ENST00000530158 1459 ntBASIC17.95■□□□□ 0.46
ACKR3P25106 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ACKR3P25106 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ACKR3P25106 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ACKR3P25106 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.94■□□□□ 0.46
ACKR3P25106 AC123595.1-201ENST00000440769 1046 ntBASIC17.94■□□□□ 0.46
ACKR3P25106 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.94■□□□□ 0.46
ACKR3P25106 YBX1P1-201ENST00000445822 960 ntBASIC17.94■□□□□ 0.46
ACKR3P25106 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.94■□□□□ 0.46
ACKR3P25106 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.94■□□□□ 0.46
ACKR3P25106 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ACKR3P25106 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.94■□□□□ 0.46
ACKR3P25106 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ACKR3P25106 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACKR3P25106 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACKR3P25106 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.93■□□□□ 0.46
ACKR3P25106 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
ACKR3P25106 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ACKR3P25106 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACKR3P25106 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ACKR3P25106 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.93■□□□□ 0.46
ACKR3P25106 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACKR3P25106 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.93■□□□□ 0.46
ACKR3P25106 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.93■□□□□ 0.46
ACKR3P25106 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.93■□□□□ 0.46
ACKR3P25106 AC138907.5-202ENST00000569484 235 ntBASIC17.93■□□□□ 0.46
ACKR3P25106 TERF1P2-201ENST00000583350 1212 ntBASIC17.93■□□□□ 0.46
ACKR3P25106 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ACKR3P25106 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.93■□□□□ 0.46
ACKR3P25106 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.93■□□□□ 0.46
ACKR3P25106 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.93■□□□□ 0.46
ACKR3P25106 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
ACKR3P25106 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.93■□□□□ 0.46
ACKR3P25106 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ACKR3P25106 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ACKR3P25106 AC121338.2-201ENST00000622535 1744 ntBASIC17.92■□□□□ 0.46
ACKR3P25106 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ACKR3P25106 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ACKR3P25106 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms