Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ERCC2P18074 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC2P18074 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ERCC2P18074 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
ERCC2P18074 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
ERCC2P18074 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.34■■□□□ 1.01
ERCC2P18074 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC2P18074 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC2P18074 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC2P18074 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC2P18074 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.34■■□□□ 1.01
ERCC2P18074 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.34■■□□□ 1.01
ERCC2P18074 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.34■■□□□ 1.01
ERCC2P18074 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC2P18074 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.34■■□□□ 1.01
ERCC2P18074 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.34■■□□□ 1.01
ERCC2P18074 AC010536.3-201ENST00000620306 533 ntBASIC21.34■■□□□ 1.01
ERCC2P18074 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC2P18074 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC2P18074 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC2P18074 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ERCC2P18074 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.33■■□□□ 1.01
ERCC2P18074 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC2P18074 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.33■■□□□ 1.01
ERCC2P18074 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC2P18074 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC2P18074 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC2P18074 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC2P18074 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ERCC2P18074 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.33■■□□□ 1.01
ERCC2P18074 AC091799.1-201ENST00000422823 811 ntBASIC21.33■■□□□ 1.01
ERCC2P18074 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ERCC2P18074 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
ERCC2P18074 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC2P18074 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC2P18074 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.33■■□□□ 1.01
ERCC2P18074 MFSD11-216ENST00000590393 1141 ntBASIC21.33■■□□□ 1.01
ERCC2P18074 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC2P18074 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ERCC2P18074 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
ERCC2P18074 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.33■■□□□ 1
ERCC2P18074 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ERCC2P18074 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.32■■□□□ 1
ERCC2P18074 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.32■■□□□ 1
ERCC2P18074 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.32■■□□□ 1
ERCC2P18074 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ERCC2P18074 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.32■■□□□ 1
ERCC2P18074 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.32■■□□□ 1
ERCC2P18074 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ERCC2P18074 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.32■■□□□ 1
ERCC2P18074 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.32■■□□□ 1
ERCC2P18074 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
ERCC2P18074 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.32■■□□□ 1
ERCC2P18074 AC011484.1-201ENST00000377652 1995 ntBASIC21.32■■□□□ 1
ERCC2P18074 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.32■■□□□ 1
ERCC2P18074 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.32■■□□□ 1
ERCC2P18074 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC2P18074 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC2P18074 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.31■■□□□ 1
ERCC2P18074 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.31■■□□□ 1
ERCC2P18074 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC2P18074 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC2P18074 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.31■■□□□ 1
ERCC2P18074 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.31■■□□□ 1
ERCC2P18074 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.31■■□□□ 1
ERCC2P18074 TERF1P5-201ENST00000477545 1207 ntBASIC21.31■■□□□ 1
ERCC2P18074 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.31■■□□□ 1
ERCC2P18074 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ERCC2P18074 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.31■■□□□ 1
ERCC2P18074 IKBKGP1-201ENST00000612193 1073 ntBASIC21.31■■□□□ 1
ERCC2P18074 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ERCC2P18074 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.31■■□□□ 1
ERCC2P18074 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.31■■□□□ 1
ERCC2P18074 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ERCC2P18074 AC006128.1-201ENST00000624704 1661 ntBASIC21.31■■□□□ 1
ERCC2P18074 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
ERCC2P18074 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.3■■□□□ 1
ERCC2P18074 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
ERCC2P18074 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.3■■□□□ 1
ERCC2P18074 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.3■■□□□ 1
ERCC2P18074 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.3■■□□□ 1
ERCC2P18074 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
ERCC2P18074 AC011767.1-201ENST00000617410 1153 ntBASIC21.3■■□□□ 1
ERCC2P18074 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ERCC2P18074 AC092437.1-201ENST00000624794 1048 ntBASIC21.3■■□□□ 1
ERCC2P18074 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.3■■□□□ 1
ERCC2P18074 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ERCC2P18074 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.3■■□□□ 1
ERCC2P18074 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.3■■□□□ 1
ERCC2P18074 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.29■■□□□ 1
ERCC2P18074 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms