Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.67■□□□□ 0.74
CCL4P13236 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.67■□□□□ 0.74
CCL4P13236 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCL4P13236 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.67■□□□□ 0.74
CCL4P13236 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCL4P13236 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL4P13236 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCL4P13236 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL4P13236 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCL4P13236 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.67■□□□□ 0.74
CCL4P13236 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL4P13236 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.66■□□□□ 0.74
CCL4P13236 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.66■□□□□ 0.74
CCL4P13236 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL4P13236 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.66■□□□□ 0.74
CCL4P13236 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.66■□□□□ 0.74
CCL4P13236 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCL4P13236 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.66■□□□□ 0.74
CCL4P13236 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCL4P13236 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.66■□□□□ 0.74
CCL4P13236 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCL4P13236 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.66■□□□□ 0.74
CCL4P13236 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.66■□□□□ 0.74
CCL4P13236 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.66■□□□□ 0.74
CCL4P13236 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL4P13236 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCL4P13236 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL4P13236 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL4P13236 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL4P13236 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.66■□□□□ 0.74
CCL4P13236 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCL4P13236 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL4P13236 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCL4P13236 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.66■□□□□ 0.74
CCL4P13236 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCL4P13236 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCL4P13236 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.65■□□□□ 0.74
CCL4P13236 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.65■□□□□ 0.74
CCL4P13236 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.65■□□□□ 0.74
CCL4P13236 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCL4P13236 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCL4P13236 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.65■□□□□ 0.74
CCL4P13236 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCL4P13236 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCL4P13236 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CCL4P13236 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.65■□□□□ 0.74
CCL4P13236 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.65■□□□□ 0.74
CCL4P13236 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.65■□□□□ 0.74
CCL4P13236 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL4P13236 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
CCL4P13236 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL4P13236 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL4P13236 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCL4P13236 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 AC008550.1-201ENST00000511500 884 ntBASIC19.64■□□□□ 0.73
CCL4P13236 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.64■□□□□ 0.73
CCL4P13236 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.64■□□□□ 0.73
CCL4P13236 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 AC233263.1-201ENST00000578059 224 ntBASIC19.64■□□□□ 0.73
CCL4P13236 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.64■□□□□ 0.73
CCL4P13236 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.64■□□□□ 0.73
CCL4P13236 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.64■□□□□ 0.73
CCL4P13236 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL4P13236 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL4P13236 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL4P13236 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL4P13236 AC116050.2-201ENST00000612102 1779 ntBASIC19.63■□□□□ 0.73
CCL4P13236 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL4P13236 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL4P13236 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.63■□□□□ 0.73
CCL4P13236 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL4P13236 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.63■□□□□ 0.73
CCL4P13236 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.63■□□□□ 0.73
CCL4P13236 UBE2SP1-201ENST00000450587 669 ntBASIC19.63■□□□□ 0.73
CCL4P13236 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL4P13236 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.63■□□□□ 0.73
CCL4P13236 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.63■□□□□ 0.73
CCL4P13236 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.63■□□□□ 0.73
CCL4P13236 RPPH1-201ENST00000516869 333 ntBASIC19.63■□□□□ 0.73
CCL4P13236 C1QBPP2-201ENST00000528754 825 ntBASIC19.63■□□□□ 0.73
CCL4P13236 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL4P13236 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms