Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.51■■□□□ 1.03
CD48P09326 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CD48P09326 AC092667.1-201ENST00000434301 2586 ntBASIC21.5■■□□□ 1.03
CD48P09326 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.5■■□□□ 1.03
CD48P09326 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CD48P09326 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CD48P09326 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.5■■□□□ 1.03
CD48P09326 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CD48P09326 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.5■■□□□ 1.03
CD48P09326 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CD48P09326 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CD48P09326 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.5■■□□□ 1.03
CD48P09326 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CD48P09326 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CD48P09326 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CD48P09326 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.5■■□□□ 1.03
CD48P09326 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CD48P09326 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CD48P09326 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CD48P09326 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CD48P09326 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CD48P09326 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.49■■□□□ 1.03
CD48P09326 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.49■■□□□ 1.03
CD48P09326 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.49■■□□□ 1.03
CD48P09326 MIR6821-201ENST00000617625 74 ntBASIC21.49■■□□□ 1.03
CD48P09326 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.49■■□□□ 1.03
CD48P09326 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CD48P09326 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CD48P09326 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.49■■□□□ 1.03
CD48P09326 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CD48P09326 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.49■■□□□ 1.03
CD48P09326 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD48P09326 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD48P09326 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD48P09326 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.48■■□□□ 1.03
CD48P09326 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.48■■□□□ 1.03
CD48P09326 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CD48P09326 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD48P09326 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CD48P09326 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.48■■□□□ 1.03
CD48P09326 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD48P09326 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CD48P09326 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CD48P09326 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.47■■□□□ 1.03
CD48P09326 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CD48P09326 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.47■■□□□ 1.03
CD48P09326 AC073314.1-201ENST00000568729 2216 ntBASIC21.47■■□□□ 1.03
CD48P09326 AC073130.3-201ENST00000624389 2278 ntBASIC21.47■■□□□ 1.03
CD48P09326 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CD48P09326 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CD48P09326 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CD48P09326 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CD48P09326 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CD48P09326 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CD48P09326 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CD48P09326 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CD48P09326 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
CD48P09326 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CD48P09326 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CD48P09326 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CD48P09326 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.47■■□□□ 1.03
CD48P09326 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CD48P09326 AC011484.1-201ENST00000377652 1995 ntBASIC21.47■■□□□ 1.03
CD48P09326 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CD48P09326 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.46■■□□□ 1.03
CD48P09326 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD48P09326 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.46■■□□□ 1.03
CD48P09326 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CD48P09326 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CD48P09326 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.46■■□□□ 1.03
CD48P09326 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD48P09326 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.46■■□□□ 1.03
CD48P09326 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD48P09326 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
CD48P09326 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD48P09326 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.46■■□□□ 1.03
CD48P09326 NTF6G-201ENST00000591094 616 ntBASIC21.46■■□□□ 1.03
CD48P09326 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.46■■□□□ 1.03
CD48P09326 AC120498.10-201ENST00000621827 505 ntBASIC21.46■■□□□ 1.03
CD48P09326 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CD48P09326 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.46■■□□□ 1.03
CD48P09326 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CD48P09326 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CD48P09326 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.46■■□□□ 1.03
CD48P09326 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.45■■□□□ 1.03
CD48P09326 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CD48P09326 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CD48P09326 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 AC034268.1-201ENST00000441047 882 ntBASIC21.45■■□□□ 1.02
CD48P09326 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.45■■□□□ 1.02
CD48P09326 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CD48P09326 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms