Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LCATP04180 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.09■□□□□ 0.49
LCATP04180 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 DUX4L2-201ENST00000561772 1275 ntBASIC18.09■□□□□ 0.49
LCATP04180 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
LCATP04180 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.09■□□□□ 0.49
LCATP04180 DUX4L6-201ENST00000626483 1275 ntBASIC18.09■□□□□ 0.49
LCATP04180 DUX4L1-201ENST00000627662 1275 ntBASIC18.09■□□□□ 0.49
LCATP04180 DUX4L8-201ENST00000629013 1275 ntBASIC18.09■□□□□ 0.49
LCATP04180 DUX4L3-201ENST00000630187 1275 ntBASIC18.09■□□□□ 0.49
LCATP04180 DUX4L7-201ENST00000630678 1275 ntBASIC18.09■□□□□ 0.49
LCATP04180 DUX4L5-201ENST00000630834 1275 ntBASIC18.09■□□□□ 0.49
LCATP04180 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LCATP04180 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.09■□□□□ 0.49
LCATP04180 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
LCATP04180 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCATP04180 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.08■□□□□ 0.49
LCATP04180 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCATP04180 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.08■□□□□ 0.49
LCATP04180 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LCATP04180 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LCATP04180 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCATP04180 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCATP04180 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCATP04180 AC010141.2-201ENST00000452426 721 ntBASIC18.08■□□□□ 0.48
LCATP04180 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.08■□□□□ 0.48
LCATP04180 AP001160.3-201ENST00000601484 763 ntBASIC18.08■□□□□ 0.48
LCATP04180 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCATP04180 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCATP04180 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.08■□□□□ 0.48
LCATP04180 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.08■□□□□ 0.48
LCATP04180 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LCATP04180 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LCATP04180 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LCATP04180 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LCATP04180 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.07■□□□□ 0.48
LCATP04180 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
LCATP04180 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
LCATP04180 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.07■□□□□ 0.48
LCATP04180 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.07■□□□□ 0.48
LCATP04180 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.07■□□□□ 0.48
LCATP04180 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.07■□□□□ 0.48
LCATP04180 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.07■□□□□ 0.48
LCATP04180 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LCATP04180 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LCATP04180 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LCATP04180 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LCATP04180 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.06■□□□□ 0.48
LCATP04180 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LCATP04180 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.06■□□□□ 0.48
LCATP04180 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LCATP04180 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.06■□□□□ 0.48
LCATP04180 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.06■□□□□ 0.48
LCATP04180 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.06■□□□□ 0.48
LCATP04180 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LCATP04180 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.06■□□□□ 0.48
LCATP04180 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LCATP04180 AC121338.2-201ENST00000622535 1744 ntBASIC18.06■□□□□ 0.48
LCATP04180 AC004854.2-201ENST00000608450 1441 ntBASIC18.06■□□□□ 0.48
LCATP04180 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
LCATP04180 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LCATP04180 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.05■□□□□ 0.48
LCATP04180 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LCATP04180 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LCATP04180 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCATP04180 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.05■□□□□ 0.48
LCATP04180 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.05■□□□□ 0.48
LCATP04180 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.05■□□□□ 0.48
LCATP04180 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LCATP04180 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LCATP04180 KRT16P2-201ENST00000414673 1423 ntBASIC18.05■□□□□ 0.48
LCATP04180 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
LCATP04180 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms