Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.51■□□□□ 0.71
MT-ND1P03886 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MT-ND1P03886 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.51■□□□□ 0.71
MT-ND1P03886 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND1P03886 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-ND1P03886 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MT-ND1P03886 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND1P03886 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-ND1P03886 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND1P03886 AC121338.2-201ENST00000622535 1744 ntBASIC19.51■□□□□ 0.71
MT-ND1P03886 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND1P03886 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-ND1P03886 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
MT-ND1P03886 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MT-ND1P03886 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
MT-ND1P03886 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
MT-ND1P03886 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MT-ND1P03886 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.5■□□□□ 0.71
MT-ND1P03886 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.5■□□□□ 0.71
MT-ND1P03886 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MT-ND1P03886 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MT-ND1P03886 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
MT-ND1P03886 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.5■□□□□ 0.71
MT-ND1P03886 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND1P03886 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND1P03886 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND1P03886 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND1P03886 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND1P03886 AC007225.1-201ENST00000566331 1836 ntBASIC19.49■□□□□ 0.71
MT-ND1P03886 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND1P03886 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.49■□□□□ 0.71
MT-ND1P03886 AP005435.1-201ENST00000529293 1178 ntBASIC19.49■□□□□ 0.71
MT-ND1P03886 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.49■□□□□ 0.71
MT-ND1P03886 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
MT-ND1P03886 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND1P03886 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND1P03886 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND1P03886 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND1P03886 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND1P03886 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND1P03886 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND1P03886 AL512408.1-201ENST00000569378 2000 ntBASIC19.49■□□□□ 0.71
MT-ND1P03886 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND1P03886 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND1P03886 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND1P03886 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND1P03886 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MT-ND1P03886 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.48■□□□□ 0.71
MT-ND1P03886 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.48■□□□□ 0.71
MT-ND1P03886 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 SLC47A1P1-202ENST00000449666 945 ntBASIC19.48■□□□□ 0.71
MT-ND1P03886 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.48■□□□□ 0.71
MT-ND1P03886 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.48■□□□□ 0.71
MT-ND1P03886 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MT-ND1P03886 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.48■□□□□ 0.71
MT-ND1P03886 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND1P03886 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
MT-ND1P03886 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND1P03886 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND1P03886 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-ND1P03886 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-ND1P03886 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND1P03886 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND1P03886 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND1P03886 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.47■□□□□ 0.71
MT-ND1P03886 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-ND1P03886 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.47■□□□□ 0.71
MT-ND1P03886 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-ND1P03886 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MT-ND1P03886 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.47■□□□□ 0.71
MT-ND1P03886 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MT-ND1P03886 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.47■□□□□ 0.71
MT-ND1P03886 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
MT-ND1P03886 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MT-ND1P03886 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms