Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.58■□□□□ 0.56
HLA-DQA2P01906 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DQA2P01906 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DQA2P01906 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DQA2P01906 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DQA2P01906 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 AC142381.2-201ENST00000566120 298 ntBASIC18.56■□□□□ 0.56
HLA-DQA2P01906 AL139246.5-201ENST00000606645 996 ntBASIC18.56■□□□□ 0.56
HLA-DQA2P01906 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.56■□□□□ 0.56
HLA-DQA2P01906 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DQA2P01906 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HLA-DQA2P01906 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 AC012414.1-201ENST00000556676 535 ntBASIC18.54■□□□□ 0.56
HLA-DQA2P01906 AL031432.3-201ENST00000607698 485 ntBASIC18.54■□□□□ 0.56
HLA-DQA2P01906 AL354811.1-201ENST00000610286 706 ntBASIC18.54■□□□□ 0.56
HLA-DQA2P01906 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DQA2P01906 AC006128.1-201ENST00000624704 1661 ntBASIC18.54■□□□□ 0.56
HLA-DQA2P01906 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.53■□□□□ 0.56
HLA-DQA2P01906 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms