Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC31.53■■■□□ 2.64
RAPGEF3O95398 AC026471.5-201ENST00000615068 467 ntBASIC31.53■■■□□ 2.64
RAPGEF3O95398 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.53■■■□□ 2.64
RAPGEF3O95398 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RAPGEF3O95398 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RAPGEF3O95398 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RAPGEF3O95398 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC31.52■■■□□ 2.64
RAPGEF3O95398 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
RAPGEF3O95398 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RAPGEF3O95398 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC31.52■■■□□ 2.64
RAPGEF3O95398 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RAPGEF3O95398 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
RAPGEF3O95398 MMP23A-201ENST00000234610 1017 ntBASIC31.51■■■□□ 2.63
RAPGEF3O95398 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC31.51■■■□□ 2.63
RAPGEF3O95398 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC31.51■■■□□ 2.63
RAPGEF3O95398 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC31.51■■■□□ 2.63
RAPGEF3O95398 AP003071.4-201ENST00000562276 1284 ntBASIC31.51■■■□□ 2.63
RAPGEF3O95398 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RAPGEF3O95398 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
RAPGEF3O95398 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
RAPGEF3O95398 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.51■■■□□ 2.63
RAPGEF3O95398 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RAPGEF3O95398 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RAPGEF3O95398 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC31.5■■■□□ 2.63
RAPGEF3O95398 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
RAPGEF3O95398 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC31.5■■■□□ 2.63
RAPGEF3O95398 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.5■■■□□ 2.63
RAPGEF3O95398 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC31.5■■■□□ 2.63
RAPGEF3O95398 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
RAPGEF3O95398 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC31.5■■■□□ 2.63
RAPGEF3O95398 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
RAPGEF3O95398 AC087742.1-201ENST00000575880 1738 ntBASIC31.49■■■□□ 2.63
RAPGEF3O95398 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RAPGEF3O95398 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
RAPGEF3O95398 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RAPGEF3O95398 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
RAPGEF3O95398 AC007322.3-201ENST00000426526 701 ntBASIC31.49■■■□□ 2.63
RAPGEF3O95398 RNF146-204ENST00000476956 884 ntTSL 2 BASIC31.49■■■□□ 2.63
RAPGEF3O95398 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.49■■■□□ 2.63
RAPGEF3O95398 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RAPGEF3O95398 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC31.49■■■□□ 2.63
RAPGEF3O95398 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RAPGEF3O95398 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.48■■■□□ 2.63
RAPGEF3O95398 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RAPGEF3O95398 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RAPGEF3O95398 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
RAPGEF3O95398 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
RAPGEF3O95398 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.48■■■□□ 2.63
RAPGEF3O95398 P4HB-223ENST00000576390 439 ntTSL 4 BASIC31.48■■■□□ 2.63
RAPGEF3O95398 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC31.48■■■□□ 2.63
RAPGEF3O95398 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.48■■■□□ 2.63
RAPGEF3O95398 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
RAPGEF3O95398 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RAPGEF3O95398 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RAPGEF3O95398 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.47■■■□□ 2.63
RAPGEF3O95398 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.47■■■□□ 2.63
RAPGEF3O95398 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RAPGEF3O95398 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RAPGEF3O95398 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
RAPGEF3O95398 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RAPGEF3O95398 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RAPGEF3O95398 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RAPGEF3O95398 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.46■■■□□ 2.63
RAPGEF3O95398 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC31.46■■■□□ 2.63
RAPGEF3O95398 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RAPGEF3O95398 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RAPGEF3O95398 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC31.46■■■□□ 2.63
RAPGEF3O95398 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC31.46■■■□□ 2.63
RAPGEF3O95398 MIR6786-201ENST00000616843 113 ntBASIC31.46■■■□□ 2.63
RAPGEF3O95398 AC006557.6-201ENST00000623071 864 ntBASIC31.46■■■□□ 2.63
RAPGEF3O95398 CABP2-204ENST00000636477 941 ntTSL 5 BASIC31.46■■■□□ 2.63
RAPGEF3O95398 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC31.46■■■□□ 2.63
RAPGEF3O95398 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RAPGEF3O95398 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RAPGEF3O95398 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC31.45■■■□□ 2.63
RAPGEF3O95398 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RAPGEF3O95398 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RAPGEF3O95398 C11orf96-202ENST00000528572 1834 ntBASIC31.45■■■□□ 2.63
RAPGEF3O95398 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RAPGEF3O95398 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.63
RAPGEF3O95398 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.45■■■□□ 2.63
RAPGEF3O95398 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC31.45■■■□□ 2.63
RAPGEF3O95398 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.45■■■□□ 2.63
RAPGEF3O95398 RMI2-205ENST00000576027 818 ntTSL 2 BASIC31.45■■■□□ 2.63
RAPGEF3O95398 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RAPGEF3O95398 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RAPGEF3O95398 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
RAPGEF3O95398 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
RAPGEF3O95398 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
RAPGEF3O95398 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC31.44■■■□□ 2.62
RAPGEF3O95398 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RAPGEF3O95398 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RAPGEF3O95398 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RAPGEF3O95398 AC005521.1-201ENST00000393351 872 ntBASIC31.44■■■□□ 2.62
RAPGEF3O95398 SAPCD2P4-201ENST00000424595 1171 ntBASIC31.44■■■□□ 2.62
RAPGEF3O95398 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC31.44■■■□□ 2.62
RAPGEF3O95398 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC31.44■■■□□ 2.62
RAPGEF3O95398 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC31.44■■■□□ 2.62
RAPGEF3O95398 AC145285.6-201ENST00000604632 637 ntBASIC31.44■■■□□ 2.62
RAPGEF3O95398 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms