Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCF11O94913 BAALC-201ENST00000297574 801 ntTSL 3 BASIC32.6■■■□□ 2.81
PCF11O94913 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
PCF11O94913 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC32.6■■■□□ 2.81
PCF11O94913 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCF11O94913 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
PCF11O94913 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC32.6■■■□□ 2.81
PCF11O94913 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
PCF11O94913 GCK-205ENST00000437084 1385 ntTSL 5 BASIC32.59■■■□□ 2.81
PCF11O94913 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC32.59■■■□□ 2.81
PCF11O94913 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC32.59■■■□□ 2.81
PCF11O94913 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PCF11O94913 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PCF11O94913 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PCF11O94913 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PCF11O94913 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
PCF11O94913 SLC29A4P2-201ENST00000504749 1089 ntBASIC32.58■■■□□ 2.81
PCF11O94913 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC32.58■■■□□ 2.81
PCF11O94913 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC32.58■■■□□ 2.81
PCF11O94913 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC32.58■■■□□ 2.81
PCF11O94913 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC32.58■■■□□ 2.81
PCF11O94913 GOLGA2P6-201ENST00000340929 2049 ntBASIC32.58■■■□□ 2.81
PCF11O94913 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PCF11O94913 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
PCF11O94913 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PCF11O94913 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC32.58■■■□□ 2.81
PCF11O94913 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PCF11O94913 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PCF11O94913 AC128676.1-201ENST00000454392 318 ntBASIC32.58■■■□□ 2.81
PCF11O94913 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC32.58■■■□□ 2.81
PCF11O94913 HLA-B-256ENST00000639848 1089 ntBASIC32.58■■■□□ 2.81
PCF11O94913 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
PCF11O94913 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PCF11O94913 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
PCF11O94913 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PCF11O94913 MMD2-204ENST00000612910 778 ntTSL 5 BASIC32.57■■■□□ 2.8
PCF11O94913 AC073648.6-201ENST00000641589 218 ntBASIC32.57■■■□□ 2.8
PCF11O94913 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PCF11O94913 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC32.56■■■□□ 2.8
PCF11O94913 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PCF11O94913 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PCF11O94913 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PCF11O94913 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
PCF11O94913 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC32.56■■■□□ 2.8
PCF11O94913 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
PCF11O94913 AL158047.1-201ENST00000445918 881 ntBASIC32.56■■■□□ 2.8
PCF11O94913 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC32.56■■■□□ 2.8
PCF11O94913 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC32.56■■■□□ 2.8
PCF11O94913 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PCF11O94913 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PCF11O94913 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
PCF11O94913 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
PCF11O94913 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC32.56■■■□□ 2.8
PCF11O94913 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
PCF11O94913 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC32.55■■■□□ 2.8
PCF11O94913 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC32.55■■■□□ 2.8
PCF11O94913 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
PCF11O94913 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC32.55■■■□□ 2.8
PCF11O94913 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC32.55■■■□□ 2.8
PCF11O94913 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC32.55■■■□□ 2.8
PCF11O94913 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
PCF11O94913 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC32.54■■■□□ 2.8
PCF11O94913 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
PCF11O94913 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
PCF11O94913 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC32.54■■■□□ 2.8
PCF11O94913 AC233263.1-201ENST00000578059 224 ntBASIC32.54■■■□□ 2.8
PCF11O94913 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
PCF11O94913 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC32.54■■■□□ 2.8
PCF11O94913 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC32.54■■■□□ 2.8
PCF11O94913 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PCF11O94913 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC32.54■■■□□ 2.8
PCF11O94913 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
PCF11O94913 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC32.53■■■□□ 2.8
PCF11O94913 AC116050.2-201ENST00000612102 1779 ntBASIC32.53■■■□□ 2.8
PCF11O94913 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
PCF11O94913 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC32.53■■■□□ 2.8
PCF11O94913 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
PCF11O94913 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC32.53■■■□□ 2.8
PCF11O94913 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PCF11O94913 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
PCF11O94913 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC32.53■■■□□ 2.8
PCF11O94913 ECEL1P3-201ENST00000427961 737 ntBASIC32.53■■■□□ 2.8
PCF11O94913 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
PCF11O94913 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
PCF11O94913 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
PCF11O94913 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC32.52■■■□□ 2.8
PCF11O94913 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC32.52■■■□□ 2.8
PCF11O94913 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
PCF11O94913 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
PCF11O94913 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
PCF11O94913 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC32.52■■■□□ 2.8
PCF11O94913 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC32.52■■■□□ 2.8
PCF11O94913 EXOC3-AS1-202ENST00000623673 1663 ntBASIC32.52■■■□□ 2.8
PCF11O94913 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
PCF11O94913 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
PCF11O94913 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
PCF11O94913 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCF11O94913 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
PCF11O94913 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
PCF11O94913 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms