Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC9.38□□□□□ -0.91
USH2AO75445 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 PRR31-201ENST00000371629 978 ntTSL 2 BASIC9.38□□□□□ -0.91
USH2AO75445 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
USH2AO75445 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC9.38□□□□□ -0.91
USH2AO75445 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC9.38□□□□□ -0.91
USH2AO75445 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC9.38□□□□□ -0.91
USH2AO75445 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
USH2AO75445 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
USH2AO75445 FITM1-202ENST00000559294 800 ntBASIC9.38□□□□□ -0.91
USH2AO75445 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC9.38□□□□□ -0.91
USH2AO75445 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC9.38□□□□□ -0.91
USH2AO75445 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 PBX1-209ENST00000485769 834 ntTSL 2 BASIC9.38□□□□□ -0.91
USH2AO75445 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC9.38□□□□□ -0.91
USH2AO75445 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC9.38□□□□□ -0.91
USH2AO75445 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
USH2AO75445 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC9.37□□□□□ -0.91
USH2AO75445 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
USH2AO75445 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC9.37□□□□□ -0.91
USH2AO75445 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC9.37□□□□□ -0.91
USH2AO75445 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC9.37□□□□□ -0.91
USH2AO75445 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC9.37□□□□□ -0.91
USH2AO75445 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 REXO2-208ENST00000539754 791 ntTSL 2 BASIC9.37□□□□□ -0.91
USH2AO75445 AF186192.3-201ENST00000583427 947 ntBASIC9.37□□□□□ -0.91
USH2AO75445 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
USH2AO75445 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
USH2AO75445 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC9.37□□□□□ -0.91
USH2AO75445 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC9.37□□□□□ -0.91
USH2AO75445 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC9.37□□□□□ -0.91
USH2AO75445 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC9.37□□□□□ -0.91
USH2AO75445 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
USH2AO75445 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC9.37□□□□□ -0.91
USH2AO75445 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC9.37□□□□□ -0.91
USH2AO75445 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC9.37□□□□□ -0.91
USH2AO75445 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
USH2AO75445 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC9.37□□□□□ -0.91
USH2AO75445 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
USH2AO75445 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC9.36□□□□□ -0.91
USH2AO75445 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC9.36□□□□□ -0.91
USH2AO75445 HTR7P1-201ENST00000538670 1336 ntBASIC9.36□□□□□ -0.91
USH2AO75445 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
USH2AO75445 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
USH2AO75445 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.91
USH2AO75445 RBM17P1-201ENST00000453646 1190 ntBASIC9.36□□□□□ -0.91
USH2AO75445 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC9.36□□□□□ -0.91
USH2AO75445 RPS15-203ENST00000586096 570 ntTSL 2 BASIC9.36□□□□□ -0.91
USH2AO75445 CABP2-204ENST00000636477 941 ntTSL 5 BASIC9.36□□□□□ -0.91
USH2AO75445 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC9.36□□□□□ -0.91
USH2AO75445 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
USH2AO75445 AC023511.2-201ENST00000618803 211 ntBASIC9.36□□□□□ -0.91
USH2AO75445 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC9.36□□□□□ -0.91
USH2AO75445 LINC01960-201ENST00000563759 1884 ntBASIC9.36□□□□□ -0.91
USH2AO75445 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC9.36□□□□□ -0.91
USH2AO75445 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
USH2AO75445 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
USH2AO75445 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC9.35□□□□□ -0.91
USH2AO75445 FAM197Y1-201ENST00000421178 764 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms