Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 AC091305.1-201ENST00000479476 895 ntBASIC17.5■□□□□ 0.39
PDCD6O75340 AF213884.3-201ENST00000563833 479 ntBASIC17.5■□□□□ 0.39
PDCD6O75340 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.5■□□□□ 0.39
PDCD6O75340 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.5■□□□□ 0.39
PDCD6O75340 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.5■□□□□ 0.39
PDCD6O75340 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.5■□□□□ 0.39
PDCD6O75340 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.5■□□□□ 0.39
PDCD6O75340 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 AP004607.4-201ENST00000530158 1459 ntBASIC17.5■□□□□ 0.39
PDCD6O75340 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PDCD6O75340 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDCD6O75340 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PDCD6O75340 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDCD6O75340 AC027702.1-201ENST00000563810 1770 ntBASIC17.49■□□□□ 0.39
PDCD6O75340 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.49■□□□□ 0.39
PDCD6O75340 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.49■□□□□ 0.39
PDCD6O75340 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.49■□□□□ 0.39
PDCD6O75340 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.49■□□□□ 0.39
PDCD6O75340 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDCD6O75340 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDCD6O75340 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDCD6O75340 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDCD6O75340 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDCD6O75340 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDCD6O75340 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDCD6O75340 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
PDCD6O75340 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PDCD6O75340 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDCD6O75340 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PDCD6O75340 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDCD6O75340 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PDCD6O75340 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDCD6O75340 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDCD6O75340 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDCD6O75340 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDCD6O75340 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.48■□□□□ 0.39
PDCD6O75340 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.48■□□□□ 0.39
PDCD6O75340 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.48■□□□□ 0.39
PDCD6O75340 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.48■□□□□ 0.39
PDCD6O75340 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.48■□□□□ 0.39
PDCD6O75340 AC012414.1-201ENST00000556676 535 ntBASIC17.48■□□□□ 0.39
PDCD6O75340 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.48■□□□□ 0.39
PDCD6O75340 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDCD6O75340 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDCD6O75340 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDCD6O75340 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PDCD6O75340 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDCD6O75340 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.48■□□□□ 0.39
PDCD6O75340 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDCD6O75340 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.47■□□□□ 0.39
PDCD6O75340 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.47■□□□□ 0.39
PDCD6O75340 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDCD6O75340 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.47■□□□□ 0.39
PDCD6O75340 AC020907.5-201ENST00000624372 1936 ntBASIC17.47■□□□□ 0.39
PDCD6O75340 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.47■□□□□ 0.39
PDCD6O75340 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDCD6O75340 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDCD6O75340 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.47■□□□□ 0.39
PDCD6O75340 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.47■□□□□ 0.39
PDCD6O75340 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDCD6O75340 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.47■□□□□ 0.39
PDCD6O75340 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.47■□□□□ 0.39
PDCD6O75340 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.47■□□□□ 0.39
PDCD6O75340 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDCD6O75340 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.47■□□□□ 0.39
PDCD6O75340 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDCD6O75340 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDCD6O75340 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.47■□□□□ 0.39
PDCD6O75340 AC011484.1-201ENST00000377652 1995 ntBASIC17.46■□□□□ 0.39
PDCD6O75340 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.46■□□□□ 0.39
PDCD6O75340 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDCD6O75340 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDCD6O75340 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PDCD6O75340 AC061975.6-201ENST00000579045 1553 ntBASIC17.46■□□□□ 0.39
PDCD6O75340 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDCD6O75340 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.46■□□□□ 0.39
PDCD6O75340 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDCD6O75340 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.46■□□□□ 0.39
PDCD6O75340 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.46■□□□□ 0.39
PDCD6O75340 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDCD6O75340 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.46■□□□□ 0.39
PDCD6O75340 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.46■□□□□ 0.39
PDCD6O75340 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDCD6O75340 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDCD6O75340 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDCD6O75340 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.46■□□□□ 0.38
PDCD6O75340 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.46■□□□□ 0.38
PDCD6O75340 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDCD6O75340 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.45■□□□□ 0.38
PDCD6O75340 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDCD6O75340 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.45■□□□□ 0.38
PDCD6O75340 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDCD6O75340 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDCD6O75340 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDCD6O75340 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDCD6O75340 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDCD6O75340 AL354811.1-201ENST00000610286 706 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms