Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.7■□□□□ 0.58
SSX4O60224 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX4O60224 AC004911.1-201ENST00000416316 871 ntBASIC18.7■□□□□ 0.58
SSX4O60224 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX4O60224 AP005435.1-201ENST00000529293 1178 ntBASIC18.7■□□□□ 0.58
SSX4O60224 KRT18P14-201ENST00000534205 1250 ntBASIC18.7■□□□□ 0.58
SSX4O60224 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX4O60224 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX4O60224 NTF6G-201ENST00000591094 616 ntBASIC18.7■□□□□ 0.58
SSX4O60224 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.7■□□□□ 0.58
SSX4O60224 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
SSX4O60224 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX4O60224 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SSX4O60224 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX4O60224 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX4O60224 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX4O60224 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SSX4O60224 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX4O60224 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.69■□□□□ 0.58
SSX4O60224 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.69■□□□□ 0.58
SSX4O60224 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SSX4O60224 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.69■□□□□ 0.58
SSX4O60224 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.69■□□□□ 0.58
SSX4O60224 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.69■□□□□ 0.58
SSX4O60224 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.69■□□□□ 0.58
SSX4O60224 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SSX4O60224 AC105233.4-201ENST00000642045 216 ntBASIC18.69■□□□□ 0.58
SSX4O60224 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SSX4O60224 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.69■□□□□ 0.58
SSX4O60224 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SSX4O60224 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX4O60224 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.68■□□□□ 0.58
SSX4O60224 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SSX4O60224 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.68■□□□□ 0.58
SSX4O60224 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.68■□□□□ 0.58
SSX4O60224 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.68■□□□□ 0.58
SSX4O60224 AC092437.1-201ENST00000624794 1048 ntBASIC18.68■□□□□ 0.58
SSX4O60224 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SSX4O60224 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.68■□□□□ 0.58
SSX4O60224 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.68■□□□□ 0.58
SSX4O60224 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SSX4O60224 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.68■□□□□ 0.58
SSX4O60224 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSX4O60224 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.67■□□□□ 0.58
SSX4O60224 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SSX4O60224 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSX4O60224 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SSX4O60224 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSX4O60224 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX4O60224 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SSX4O60224 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SSX4O60224 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SSX4O60224 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX4O60224 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX4O60224 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
SSX4O60224 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.67■□□□□ 0.58
SSX4O60224 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.67■□□□□ 0.58
SSX4O60224 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SSX4O60224 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms