Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.74■□□□□ 0.91
TSPAN6O43657 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN6O43657 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TSPAN6O43657 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TSPAN6O43657 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.74■□□□□ 0.91
TSPAN6O43657 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TSPAN6O43657 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.74■□□□□ 0.91
TSPAN6O43657 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.74■□□□□ 0.91
TSPAN6O43657 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.74■□□□□ 0.91
TSPAN6O43657 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.74■□□□□ 0.91
TSPAN6O43657 AC100791.3-201ENST00000617619 330 ntBASIC20.74■□□□□ 0.91
TSPAN6O43657 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.74■□□□□ 0.91
TSPAN6O43657 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSPAN6O43657 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.73■□□□□ 0.91
TSPAN6O43657 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TSPAN6O43657 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
TSPAN6O43657 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.73■□□□□ 0.91
TSPAN6O43657 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.73■□□□□ 0.91
TSPAN6O43657 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.73■□□□□ 0.91
TSPAN6O43657 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.73■□□□□ 0.91
TSPAN6O43657 KRT18P6-201ENST00000555540 1265 ntBASIC20.73■□□□□ 0.91
TSPAN6O43657 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.73■□□□□ 0.91
TSPAN6O43657 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.73■□□□□ 0.91
TSPAN6O43657 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSPAN6O43657 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN6O43657 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN6O43657 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN6O43657 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TSPAN6O43657 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TSPAN6O43657 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN6O43657 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN6O43657 AC007322.3-201ENST00000426526 701 ntBASIC20.72■□□□□ 0.91
TSPAN6O43657 CD99P1-205ENST00000527459 561 ntBASIC20.72■□□□□ 0.91
TSPAN6O43657 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.72■□□□□ 0.91
TSPAN6O43657 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN6O43657 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
TSPAN6O43657 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSPAN6O43657 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.71■□□□□ 0.91
TSPAN6O43657 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN6O43657 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN6O43657 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN6O43657 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.71■□□□□ 0.91
TSPAN6O43657 AC098934.4-201ENST00000564127 592 ntBASIC20.71■□□□□ 0.91
TSPAN6O43657 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.71■□□□□ 0.91
TSPAN6O43657 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN6O43657 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN6O43657 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TSPAN6O43657 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN6O43657 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.7■□□□□ 0.9
TSPAN6O43657 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TSPAN6O43657 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.7■□□□□ 0.9
TSPAN6O43657 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN6O43657 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TSPAN6O43657 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.7■□□□□ 0.9
TSPAN6O43657 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.7■□□□□ 0.9
TSPAN6O43657 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.7■□□□□ 0.9
TSPAN6O43657 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.7■□□□□ 0.9
TSPAN6O43657 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TSPAN6O43657 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.7■□□□□ 0.9
TSPAN6O43657 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TSPAN6O43657 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.69■□□□□ 0.9
TSPAN6O43657 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
TSPAN6O43657 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 Z98882.1-201ENST00000622160 2253 ntBASIC20.69■□□□□ 0.9
TSPAN6O43657 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TSPAN6O43657 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.69■□□□□ 0.9
TSPAN6O43657 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.69■□□□□ 0.9
TSPAN6O43657 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.69■□□□□ 0.9
TSPAN6O43657 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms