Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.36■■□□□ 1.33
CHMP2AO43633 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.36■■□□□ 1.33
CHMP2AO43633 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.36■■□□□ 1.33
CHMP2AO43633 AC105036.2-201ENST00000569468 176 ntBASIC23.36■■□□□ 1.33
CHMP2AO43633 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHMP2AO43633 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHMP2AO43633 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP2AO43633 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.35■■□□□ 1.33
CHMP2AO43633 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
CHMP2AO43633 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CHMP2AO43633 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.35■■□□□ 1.33
CHMP2AO43633 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP2AO43633 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP2AO43633 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.35■■□□□ 1.33
CHMP2AO43633 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.35■■□□□ 1.33
CHMP2AO43633 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
CHMP2AO43633 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CHMP2AO43633 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP2AO43633 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP2AO43633 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP2AO43633 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.35■■□□□ 1.33
CHMP2AO43633 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP2AO43633 AF106564.1-201ENST00000607058 2553 ntBASIC23.35■■□□□ 1.33
CHMP2AO43633 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHMP2AO43633 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.34■■□□□ 1.33
CHMP2AO43633 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP2AO43633 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP2AO43633 AC093787.1-201ENST00000450396 207 ntBASIC23.34■■□□□ 1.33
CHMP2AO43633 AF201337.1-201ENST00000520239 748 ntBASIC23.34■■□□□ 1.33
CHMP2AO43633 AC008694.1-202ENST00000636953 945 ntBASIC23.34■■□□□ 1.33
CHMP2AO43633 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP2AO43633 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP2AO43633 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP2AO43633 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHMP2AO43633 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CHMP2AO43633 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.33■■□□□ 1.33
CHMP2AO43633 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CHMP2AO43633 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP2AO43633 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CHMP2AO43633 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
CHMP2AO43633 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CHMP2AO43633 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.33■■□□□ 1.33
CHMP2AO43633 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP2AO43633 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.33■■□□□ 1.33
CHMP2AO43633 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.33■■□□□ 1.33
CHMP2AO43633 AC069236.1-201ENST00000604339 616 ntBASIC23.33■■□□□ 1.33
CHMP2AO43633 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CHMP2AO43633 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHMP2AO43633 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
CHMP2AO43633 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.33■■□□□ 1.33
CHMP2AO43633 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CHMP2AO43633 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP2AO43633 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP2AO43633 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP2AO43633 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP2AO43633 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CHMP2AO43633 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.32■■□□□ 1.32
CHMP2AO43633 AL355802.2-201ENST00000402069 882 ntBASIC23.32■■□□□ 1.32
CHMP2AO43633 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.32■■□□□ 1.32
CHMP2AO43633 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.32■■□□□ 1.32
CHMP2AO43633 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CHMP2AO43633 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CHMP2AO43633 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP2AO43633 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP2AO43633 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP2AO43633 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHMP2AO43633 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CHMP2AO43633 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP2AO43633 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP2AO43633 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP2AO43633 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP2AO43633 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP2AO43633 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CHMP2AO43633 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP2AO43633 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP2AO43633 GUSBP6-202ENST00000438529 1198 ntBASIC23.31■■□□□ 1.32
CHMP2AO43633 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.31■■□□□ 1.32
CHMP2AO43633 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.31■■□□□ 1.32
CHMP2AO43633 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.31■■□□□ 1.32
CHMP2AO43633 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.31■■□□□ 1.32
CHMP2AO43633 AC133552.2-202ENST00000575694 574 ntBASIC23.31■■□□□ 1.32
CHMP2AO43633 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
CHMP2AO43633 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.31■■□□□ 1.32
CHMP2AO43633 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.31■■□□□ 1.32
CHMP2AO43633 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CHMP2AO43633 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.31■■□□□ 1.32
CHMP2AO43633 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHMP2AO43633 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.31■■□□□ 1.32
CHMP2AO43633 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP2AO43633 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP2AO43633 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP2AO43633 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP2AO43633 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.3■■□□□ 1.32
CHMP2AO43633 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP2AO43633 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CHMP2AO43633 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP2AO43633 TSPY6P-201ENST00000448518 926 ntBASIC23.3■■□□□ 1.32
CHMP2AO43633 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.3■■□□□ 1.32
CHMP2AO43633 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHMP2AO43633 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms