Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPM1DO15297 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPM1DO15297 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PPM1DO15297 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
PPM1DO15297 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.2■□□□□ 0.82
PPM1DO15297 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPM1DO15297 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.2■□□□□ 0.82
PPM1DO15297 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.2■□□□□ 0.82
PPM1DO15297 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PPM1DO15297 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.2■□□□□ 0.82
PPM1DO15297 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPM1DO15297 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.2■□□□□ 0.82
PPM1DO15297 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PPM1DO15297 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.2■□□□□ 0.82
PPM1DO15297 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PPM1DO15297 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PPM1DO15297 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPM1DO15297 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.19■□□□□ 0.82
PPM1DO15297 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PPM1DO15297 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PPM1DO15297 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.19■□□□□ 0.82
PPM1DO15297 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.19■□□□□ 0.82
PPM1DO15297 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.19■□□□□ 0.82
PPM1DO15297 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.19■□□□□ 0.82
PPM1DO15297 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PPM1DO15297 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PPM1DO15297 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PPM1DO15297 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PPM1DO15297 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PPM1DO15297 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.18■□□□□ 0.82
PPM1DO15297 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.18■□□□□ 0.82
PPM1DO15297 TMEM191A-211ENST00000637163 1067 ntBASIC20.18■□□□□ 0.82
PPM1DO15297 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.18■□□□□ 0.82
PPM1DO15297 AC244015.2-201ENST00000616358 1861 ntBASIC20.18■□□□□ 0.82
PPM1DO15297 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PPM1DO15297 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PPM1DO15297 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPM1DO15297 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.17■□□□□ 0.82
PPM1DO15297 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PPM1DO15297 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPM1DO15297 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
PPM1DO15297 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PPM1DO15297 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPM1DO15297 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPM1DO15297 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.17■□□□□ 0.82
PPM1DO15297 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.17■□□□□ 0.82
PPM1DO15297 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.17■□□□□ 0.82
PPM1DO15297 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPM1DO15297 FAM21FP-204ENST00000608637 956 ntBASIC20.17■□□□□ 0.82
PPM1DO15297 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PPM1DO15297 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.17■□□□□ 0.82
PPM1DO15297 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PPM1DO15297 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPM1DO15297 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPM1DO15297 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PPM1DO15297 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.16■□□□□ 0.82
PPM1DO15297 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.16■□□□□ 0.82
PPM1DO15297 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.16■□□□□ 0.82
PPM1DO15297 CDV3P1-201ENST00000471403 739 ntBASIC20.16■□□□□ 0.82
PPM1DO15297 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPM1DO15297 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.16■□□□□ 0.82
PPM1DO15297 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PPM1DO15297 MYC-209ENST00000641252 345 ntBASIC20.16■□□□□ 0.82
PPM1DO15297 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
PPM1DO15297 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.16■□□□□ 0.82
PPM1DO15297 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
PPM1DO15297 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
PPM1DO15297 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.16■□□□□ 0.82
PPM1DO15297 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.16■□□□□ 0.82
PPM1DO15297 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PPM1DO15297 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PPM1DO15297 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PPM1DO15297 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PPM1DO15297 AC097658.1-201ENST00000475555 843 ntBASIC20.15■□□□□ 0.82
PPM1DO15297 RNA5SP413-201ENST00000516373 109 ntBASIC20.15■□□□□ 0.82
PPM1DO15297 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.15■□□□□ 0.82
PPM1DO15297 AC083880.1-201ENST00000608266 535 ntBASIC20.15■□□□□ 0.82
PPM1DO15297 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PPM1DO15297 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.15■□□□□ 0.82
PPM1DO15297 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PPM1DO15297 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms