Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
CDX4O14627 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDX4O14627 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDX4O14627 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.2■□□□□ 0.82
CDX4O14627 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.2■□□□□ 0.82
CDX4O14627 C11orf96-202ENST00000528572 1834 ntBASIC20.2■□□□□ 0.82
CDX4O14627 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.19■□□□□ 0.82
CDX4O14627 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDX4O14627 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.19■□□□□ 0.82
CDX4O14627 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.19■□□□□ 0.82
CDX4O14627 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CDX4O14627 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.19■□□□□ 0.82
CDX4O14627 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.19■□□□□ 0.82
CDX4O14627 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.19■□□□□ 0.82
CDX4O14627 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDX4O14627 AC120498.8-201ENST00000614275 531 ntBASIC20.19■□□□□ 0.82
CDX4O14627 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CDX4O14627 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDX4O14627 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.18■□□□□ 0.82
CDX4O14627 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX4O14627 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.18■□□□□ 0.82
CDX4O14627 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDX4O14627 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDX4O14627 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDX4O14627 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDX4O14627 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDX4O14627 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.18■□□□□ 0.82
CDX4O14627 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.18■□□□□ 0.82
CDX4O14627 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.18■□□□□ 0.82
CDX4O14627 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.18■□□□□ 0.82
CDX4O14627 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.18■□□□□ 0.82
CDX4O14627 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.18■□□□□ 0.82
CDX4O14627 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX4O14627 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX4O14627 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDX4O14627 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDX4O14627 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDX4O14627 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CDX4O14627 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 TMPOP1-202ENST00000424642 1267 ntBASIC20.17■□□□□ 0.82
CDX4O14627 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.17■□□□□ 0.82
CDX4O14627 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 KRT18P35-201ENST00000510488 1269 ntBASIC20.17■□□□□ 0.82
CDX4O14627 PRKY-204ENST00000533551 1019 ntBASIC20.17■□□□□ 0.82
CDX4O14627 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.17■□□□□ 0.82
CDX4O14627 C2orf69P4-201ENST00000565394 541 ntBASIC20.17■□□□□ 0.82
CDX4O14627 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 CD177P1-201ENST00000606252 935 ntBASIC20.17■□□□□ 0.82
CDX4O14627 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CDX4O14627 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.17■□□□□ 0.82
CDX4O14627 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.17■□□□□ 0.82
CDX4O14627 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.17■□□□□ 0.82
CDX4O14627 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDX4O14627 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.17■□□□□ 0.82
CDX4O14627 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDX4O14627 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.16■□□□□ 0.82
CDX4O14627 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.16■□□□□ 0.82
CDX4O14627 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX4O14627 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX4O14627 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX4O14627 KRASP1-201ENST00000407852 552 ntBASIC20.16■□□□□ 0.82
CDX4O14627 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.16■□□□□ 0.82
CDX4O14627 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.16■□□□□ 0.82
CDX4O14627 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDX4O14627 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.16■□□□□ 0.82
CDX4O14627 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.16■□□□□ 0.82
CDX4O14627 RARRES2P10-201ENST00000564312 460 ntBASIC20.16■□□□□ 0.82
CDX4O14627 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.16■□□□□ 0.82
CDX4O14627 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDX4O14627 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX4O14627 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDX4O14627 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.15■□□□□ 0.82
CDX4O14627 RN7SL850P-201ENST00000579959 291 ntBASIC20.15■□□□□ 0.82
CDX4O14627 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.15■□□□□ 0.82
CDX4O14627 AL353708.3-201ENST00000610272 989 ntBASIC20.15■□□□□ 0.82
CDX4O14627 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDX4O14627 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDX4O14627 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDX4O14627 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDX4O14627 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDX4O14627 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms