Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB4O00305 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB4O00305 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB4O00305 BX276092.2-201ENST00000417668 665 ntBASIC20.52■□□□□ 0.88
CACNB4O00305 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB4O00305 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB4O00305 AC010980.2-201ENST00000587099 1412 ntBASIC20.52■□□□□ 0.87
CACNB4O00305 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CACNB4O00305 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CACNB4O00305 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB4O00305 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB4O00305 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB4O00305 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB4O00305 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB4O00305 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB4O00305 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB4O00305 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.51■□□□□ 0.87
CACNB4O00305 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB4O00305 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.51■□□□□ 0.87
CACNB4O00305 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB4O00305 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB4O00305 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB4O00305 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB4O00305 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CACNB4O00305 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB4O00305 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB4O00305 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CACNB4O00305 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB4O00305 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CACNB4O00305 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CACNB4O00305 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB4O00305 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB4O00305 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CACNB4O00305 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.5■□□□□ 0.87
CACNB4O00305 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CACNB4O00305 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.5■□□□□ 0.87
CACNB4O00305 AC007322.3-201ENST00000426526 701 ntBASIC20.5■□□□□ 0.87
CACNB4O00305 AC092118.2-201ENST00000613495 667 ntBASIC20.5■□□□□ 0.87
CACNB4O00305 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB4O00305 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB4O00305 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB4O00305 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB4O00305 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.49■□□□□ 0.87
CACNB4O00305 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
CACNB4O00305 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CACNB4O00305 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CACNB4O00305 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CACNB4O00305 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB4O00305 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CACNB4O00305 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB4O00305 CD99P1-205ENST00000527459 561 ntBASIC20.49■□□□□ 0.87
CACNB4O00305 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.49■□□□□ 0.87
CACNB4O00305 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.49■□□□□ 0.87
CACNB4O00305 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.49■□□□□ 0.87
CACNB4O00305 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB4O00305 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.49■□□□□ 0.87
CACNB4O00305 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.49■□□□□ 0.87
CACNB4O00305 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB4O00305 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB4O00305 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB4O00305 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB4O00305 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB4O00305 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.48■□□□□ 0.87
CACNB4O00305 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB4O00305 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB4O00305 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.48■□□□□ 0.87
CACNB4O00305 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.48■□□□□ 0.87
CACNB4O00305 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.48■□□□□ 0.87
CACNB4O00305 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.48■□□□□ 0.87
CACNB4O00305 KRT18P6-201ENST00000555540 1265 ntBASIC20.48■□□□□ 0.87
CACNB4O00305 AC098934.4-201ENST00000564127 592 ntBASIC20.48■□□□□ 0.87
CACNB4O00305 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB4O00305 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB4O00305 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB4O00305 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB4O00305 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB4O00305 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB4O00305 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB4O00305 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB4O00305 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
CACNB4O00305 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CACNB4O00305 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB4O00305 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.47■□□□□ 0.87
CACNB4O00305 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB4O00305 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB4O00305 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB4O00305 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB4O00305 AC100791.3-201ENST00000617619 330 ntBASIC20.47■□□□□ 0.87
CACNB4O00305 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.47■□□□□ 0.87
CACNB4O00305 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB4O00305 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB4O00305 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CACNB4O00305 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB4O00305 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB4O00305 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB4O00305 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB4O00305 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.46■□□□□ 0.87
CACNB4O00305 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CACNB4O00305 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CACNB4O00305 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms