Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.93■□□□□ 0.94
AP3B1O00203 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.93■□□□□ 0.94
AP3B1O00203 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3B1O00203 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.93■□□□□ 0.94
AP3B1O00203 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
AP3B1O00203 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP3B1O00203 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
AP3B1O00203 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
AP3B1O00203 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.93■□□□□ 0.94
AP3B1O00203 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3B1O00203 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3B1O00203 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP3B1O00203 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3B1O00203 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP3B1O00203 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3B1O00203 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.92■□□□□ 0.94
AP3B1O00203 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3B1O00203 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.92■□□□□ 0.94
AP3B1O00203 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AP3B1O00203 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.92■□□□□ 0.94
AP3B1O00203 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.92■□□□□ 0.94
AP3B1O00203 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.92■□□□□ 0.94
AP3B1O00203 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
AP3B1O00203 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
AP3B1O00203 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3B1O00203 AC007225.1-201ENST00000566331 1836 ntBASIC20.92■□□□□ 0.94
AP3B1O00203 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
AP3B1O00203 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3B1O00203 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
AP3B1O00203 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.91■□□□□ 0.94
AP3B1O00203 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3B1O00203 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3B1O00203 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP3B1O00203 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3B1O00203 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP3B1O00203 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.91■□□□□ 0.94
AP3B1O00203 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
AP3B1O00203 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP3B1O00203 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.91■□□□□ 0.94
AP3B1O00203 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3B1O00203 CCDC92B-201ENST00000575506 885 ntBASIC20.91■□□□□ 0.94
AP3B1O00203 GABARAPL3-202ENST00000624044 1851 ntBASIC20.91■□□□□ 0.94
AP3B1O00203 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.91■□□□□ 0.94
AP3B1O00203 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3B1O00203 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.9■□□□□ 0.94
AP3B1O00203 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
AP3B1O00203 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
AP3B1O00203 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.9■□□□□ 0.94
AP3B1O00203 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.9■□□□□ 0.94
AP3B1O00203 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
AP3B1O00203 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
AP3B1O00203 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.9■□□□□ 0.94
AP3B1O00203 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.9■□□□□ 0.94
AP3B1O00203 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.9■□□□□ 0.94
AP3B1O00203 AP001160.3-201ENST00000601484 763 ntBASIC20.9■□□□□ 0.94
AP3B1O00203 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.9■□□□□ 0.94
AP3B1O00203 RARRES2P11-201ENST00000635158 484 ntBASIC20.9■□□□□ 0.94
AP3B1O00203 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.9■□□□□ 0.94
AP3B1O00203 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3B1O00203 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.89■□□□□ 0.94
AP3B1O00203 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.89■□□□□ 0.94
AP3B1O00203 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP3B1O00203 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.89■□□□□ 0.93
AP3B1O00203 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP3B1O00203 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.89■□□□□ 0.93
AP3B1O00203 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.89■□□□□ 0.93
AP3B1O00203 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.89■□□□□ 0.93
AP3B1O00203 AC104187.1-201ENST00000607510 612 ntBASIC20.89■□□□□ 0.93
AP3B1O00203 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
AP3B1O00203 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP3B1O00203 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
AP3B1O00203 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP3B1O00203 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP3B1O00203 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP3B1O00203 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.89■□□□□ 0.93
AP3B1O00203 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AP3B1O00203 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
AP3B1O00203 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AP3B1O00203 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.88■□□□□ 0.93
AP3B1O00203 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.88■□□□□ 0.93
AP3B1O00203 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.88■□□□□ 0.93
AP3B1O00203 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms