Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D3BA6NDS4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.12■□□□□ 0.97
TBC1D3BA6NDS4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.11■□□□□ 0.97
TBC1D3BA6NDS4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 AC233723.2-201ENST00000623798 2106 ntBASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 AC128676.1-201ENST00000454392 318 ntBASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 AC026366.1-201ENST00000488803 879 ntBASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 GUSBP5-202ENST00000510805 1989 ntBASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D3BA6NDS4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.09■□□□□ 0.97
TBC1D3BA6NDS4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 RPS2P52-201ENST00000469610 820 ntBASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 AP003097.1-201ENST00000530657 1135 ntBASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.08■□□□□ 0.97
TBC1D3BA6NDS4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TBC1D3BA6NDS4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TBC1D3BA6NDS4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TBC1D3BA6NDS4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TBC1D3BA6NDS4 AC116050.2-201ENST00000612102 1779 ntBASIC21.08■□□□□ 0.96
TBC1D3BA6NDS4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TBC1D3BA6NDS4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TBC1D3BA6NDS4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 AC098590.1-201ENST00000468126 897 ntBASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.07■□□□□ 0.96
TBC1D3BA6NDS4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TBC1D3BA6NDS4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.06■□□□□ 0.96
TBC1D3BA6NDS4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TBC1D3BA6NDS4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
TBC1D3BA6NDS4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TBC1D3BA6NDS4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TBC1D3BA6NDS4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TBC1D3BA6NDS4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TBC1D3BA6NDS4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TBC1D3BA6NDS4 AL158047.1-201ENST00000445918 881 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms