Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV27A0A0K0K1C4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
TRBV27A0A0K0K1C4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 SYT6-210ENST00000641643 1587 ntBASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 AC011484.1-201ENST00000377652 1995 ntBASIC14.64□□□□□ -0.07
TRBV27A0A0K0K1C4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 SERBP1P1-201ENST00000396021 1160 ntBASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 RARRES2P1-201ENST00000474487 481 ntBASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 AC009237.3-201ENST00000393279 1427 ntBASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV27A0A0K0K1C4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 BX005040.4-201ENST00000637145 1518 ntBASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 RNF165-205ENST00000588679 2904 ntBASIC14.62□□□□□ -0.07
TRBV27A0A0K0K1C4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms