Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRGV4A0A0C4DH28 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 AC123595.1-201ENST00000440769 1046 ntBASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 YBX1P1-201ENST00000445822 960 ntBASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 AC120498.10-201ENST00000621827 505 ntBASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRGV4A0A0C4DH28 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 ZNRF2P3-201ENST00000424200 374 ntBASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRGV4A0A0C4DH28 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 EEF1DP3-203ENST00000566025 782 ntBASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV4A0A0C4DH28 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV4A0A0C4DH28 AP004607.4-201ENST00000530158 1459 ntBASIC14.83□□□□□ -0.03
TRGV4A0A0C4DH28 AL049796.1-201ENST00000565336 1766 ntBASIC14.83□□□□□ -0.03
TRGV4A0A0C4DH28 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV4A0A0C4DH28 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.83□□□□□ -0.03
TRGV4A0A0C4DH28 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV4A0A0C4DH28 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms