Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV12-1A0A0B4J245 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 TCF3P1-201ENST00000423021 1937 ntBASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 AC139795.1-202ENST00000500444 432 ntBASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 MIR6722-201ENST00000617286 78 ntBASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV12-1A0A0B4J245 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-1A0A0B4J245 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 AP004607.7-201ENST00000527152 1677 ntBASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 AC068587.7-201ENST00000641602 218 ntBASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV12-1A0A0B4J245 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 AC004408.2-201ENST00000623613 2777 ntBASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV12-1A0A0B4J245 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms