Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
TRAV19A0A0A6YYK7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.52■■□□□ 1.04
TRAV19A0A0A6YYK7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.52■■□□□ 1.04
TRAV19A0A0A6YYK7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV19A0A0A6YYK7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV19A0A0A6YYK7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRAV19A0A0A6YYK7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 KRT18P68-201ENST00000392293 1000 ntBASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 AC116050.2-201ENST00000612102 1779 ntBASIC21.51■■□□□ 1.03
TRAV19A0A0A6YYK7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
TRAV19A0A0A6YYK7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 ESRRAP1-201ENST00000400596 1257 ntBASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV19A0A0A6YYK7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV19A0A0A6YYK7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 CYP21A1P-202ENST00000354927 1481 ntBASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 AC066615.1-201ENST00000640911 628 ntBASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 AC133561.1-201ENST00000568600 2415 ntBASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.47■■□□□ 1.03
TRAV19A0A0A6YYK7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAV19A0A0A6YYK7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV19A0A0A6YYK7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV19A0A0A6YYK7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms