Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 ZNRF2P2-203ENST00000454624 420 ntBASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV9-1A0A075B6T8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.09
TRAV9-1A0A075B6T8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAV9-1A0A075B6T8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV9-1A0A075B6T8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV9-1A0A075B6T8 AC005332.7-201ENST00000614046 2005 ntBASIC15.58■□□□□ 0.09
TRAV9-1A0A075B6T8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV9-1A0A075B6T8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 MIR6765-201ENST00000614092 87 ntBASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV9-1A0A075B6T8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 AC079598.2-202ENST00000546624 1451 ntBASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV9-1A0A075B6T8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV9-1A0A075B6T8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV9-1A0A075B6T8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV9-1A0A075B6T8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV9-1A0A075B6T8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRAV9-1A0A075B6T8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV9-1A0A075B6T8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms