Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MX1-203ENST00000398600 3470 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 LINC01460-201ENST00000379677 2860 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 SFTPB-201ENST00000393822 3666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 B3GALT5-AS1-201ENST00000329618 1357 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 DLEU1-234ENST00000491615 1451 ntTSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC008534.1-201ENST00000513849 1940 ntTSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 WISP1-202ENST00000250160 3844 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 MTFR1L-204ENST00000374307 1868 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 KCNA2-211ENST00000639233 5256 ntTSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 PCNX2-205ENST00000430153 1982 ntTSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC026877.1-201ENST00000476047 1411 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 CELF2-215ENST00000636488 3908 ntTSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 ZDHHC11B-202ENST00000508859 1631 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 DMP1-202ENST00000339673 2682 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AP001425.1-201ENST00000632732 1940 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 TRO-208ENST00000420798 3613 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 LYPD4-203ENST00000609812 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 MPHOSPH6-201ENST00000258169 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 RPLP1-201ENST00000260379 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 CIB4-201ENST00000288861 773 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 IDSP1-201ENST00000324799 376 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 IL25-202ENST00000397242 744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 CAPSL-202ENST00000397367 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 LINC01716-202ENST00000437350 298 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AL672032.1-201ENST00000440614 938 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 OR6L1P-201ENST00000441446 910 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 SMIM10L2B-AS1-201ENST00000453528 1027 ntTSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AL139220.2-215ENST00000453688 654 ntTSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 RN7SL683P-201ENST00000460552 270 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 SKA1-204ENST00000488454 669 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 LINC00635-207ENST00000488852 1197 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC105460.1-201ENST00000509399 830 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC136443.1-201ENST00000526173 355 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 ARMS2-201ENST00000528446 818 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AP003059.2-201ENST00000532979 503 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC025252.1-201ENST00000535247 556 ntTSL 4 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 HPR-202ENST00000540303 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC078962.2-201ENST00000541885 712 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC007610.3-201ENST00000566879 934 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC120498.2-201ENST00000566997 249 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 LINC00511-204ENST00000577828 538 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC006441.4-201ENST00000583161 636 ntTSL 3 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AL110115.2-201ENST00000611296 325 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 Metazoa_SRP.61-201ENST00000613464 315 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC012676.4-201ENST00000616838 582 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 CENPP-204ENST00000618653 570 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 FAM170A-207ENST00000620555 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AC117503.5-201ENST00000623681 549 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 AP001525.1-201ENST00000624611 236 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 FAM236C-201ENST00000636267 463 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 MAPK10-310ENST00000641384 2213 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 RPE-201ENST00000354506 3165 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 SEC22C-201ENST00000264454 1380 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 AL355922.2-201ENST00000557335 1398 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 LINC02241-201ENST00000502427 1687 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 NVL-216ENST00000482491 3003 ntTSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 NDUFC2-203ENST00000527806 1888 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 PPT1-209ENST00000530076 1872 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 SVILP1-201ENST00000422642 2676 ntBASIC9.06□□□□□ -0.96
SNX18Q96RF0 SRGAP2-217ENST00000624873 4705 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SNX18Q96RF0 CAPN2-202ENST00000433674 3264 ntTSL 2 BASIC9.06□□□□□ -0.96
SNX18Q96RF0 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 MMP27-201ENST00000260229 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 MAPK10-255ENST00000641020 2412 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 AL133384.2-201ENST00000623755 2954 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 AC007038.1-201ENST00000452057 2199 ntTSL 2 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 RPL29-201ENST00000294189 723 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms