Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC007603.2-201ENST00000623281 506 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AC233300.1-201ENST00000624323 817 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 MRPL11-203ENST00000430466 1527 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 ZNF507-202ENST00000355898 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 XKR9-201ENST00000408926 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 DACH2-206ENST00000508860 1775 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 PPP2R2B-205ENST00000394414 2262 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 KIF1B-205ENST00000377093 7565 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 PDE9A-204ENST00000335512 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 DPF2-201ENST00000252268 2462 ntTSL 5 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 SRSF7-209ENST00000446327 2453 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 TMBIM4-209ENST00000544599 2240 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 CLUAP1-203ENST00000572600 2221 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AC023301.1-201ENST00000584727 2206 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 TTTY14-201ENST00000324446 1495 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 ZNF682-202ENST00000397162 3164 ntTSL 4 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 TPK1-201ENST00000360057 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 VIT-205ENST00000404084 2438 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AL603865.1-201ENST00000403062 1348 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 VIT-201ENST00000379241 2525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 EPSTI1-201ENST00000313624 3114 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 HTR3B-202ENST00000537778 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AP001180.1-201ENST00000562202 3566 ntTSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 THOC5-204ENST00000397873 2374 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 FCGR2B-202ENST00000358671 2115 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 ACSL6-221ENST00000543479 2139 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 TMEM237-203ENST00000409883 5415 ntAPPRIS P4 TSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 ANKRD6-213ENST00000520793 2489 ntTSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AC006213.1-201ENST00000586860 2550 ntTSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 MYT1L-203ENST00000407844 3642 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 CAPN3-205ENST00000357568 2669 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 TRAV13-2-201ENST00000390439 410 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 LINC00694-201ENST00000416124 729 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 IFIT6P-201ENST00000418257 1194 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 MIR205HG-204ENST00000431096 908 ntTSL 3 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AL023653.1-201ENST00000432513 326 ntTSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AC068279.1-201ENST00000444323 888 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AC016700.3-201ENST00000455541 448 ntTSL 3 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 LINC00698-204ENST00000475886 758 ntTSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AP002852.1-201ENST00000489699 385 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AC002384.1-201ENST00000490162 429 ntTSL 3 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AC003029.1-201ENST00000493495 603 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 MBL1P-202ENST00000497731 758 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AP000873.2-208ENST00000500634 876 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AC090519.1-201ENST00000508195 1002 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 Metazoa_SRP.53-201ENST00000548393 281 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AC073476.2-201ENST00000569668 497 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 CDRT15P1-201ENST00000577632 564 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 CSAG4-202ENST00000583763 237 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 ZNF268-218ENST00000592241 686 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AC010615.2-206ENST00000593653 556 ntTSL 3 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AL355376.2-202ENST00000604686 241 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AC126915.3-201ENST00000620111 208 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 HNRNPCL2-202ENST00000621994 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 CD163L1-202ENST00000416109 4603 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 MARCH10-203ENST00000544856 3338 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 CDH23-213ENST00000619887 4224 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 GP2-203ENST00000381360 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 LMOD1-201ENST00000367288 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 ATG13-207ENST00000526508 4199 ntTSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 DNAJC5G-201ENST00000296097 2008 ntTSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 TECPR2-203ENST00000558678 4281 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 AL512274.1-201ENST00000562471 2027 ntBASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 SPIN3-218ENST00000639007 4277 ntAPPRIS P1 TSL 4 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 HAO2-205ENST00000622548 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 ACOX1-202ENST00000301608 2215 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 LINC01346-201ENST00000412674 3242 ntTSL 2 BASIC9.07□□□□□ -0.96
NPIPA3F8WFD2 VNN3-204ENST00000414302 1312 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 VWA5A-201ENST00000361352 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 EXOSC2-202ENST00000372351 1885 ntTSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 XRCC6-204ENST00000405506 1958 ntTSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 PRAMEF2-201ENST00000240189 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 BBS10-201ENST00000393262 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AC023509.2-201ENST00000548347 2297 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 SLC22A11-201ENST00000301891 3860 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
NPIPA3F8WFD2 AL356750.1-201ENST00000623911 2496 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 487.7 ms