Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RNA5S17-201ENST00000363500 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S4-201ENST00000363511 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S6-201ENST00000363754 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5SP202-201ENST00000364315 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S14-201ENST00000364485 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S2-201ENST00000364718 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S15-201ENST00000365055 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S16-201ENST00000365387 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S7-201ENST00000365651 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S13-201ENST00000365656 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 HNRNPA1P37-201ENST00000404243 969 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 AC073316.1-205ENST00000404626 557 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 LINC00378-201ENST00000413402 403 ntTSL 5 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 AL662800.1-201ENST00000415195 851 ntTSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 FRY-AS1-201ENST00000428419 1115 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 RN7SL748P-201ENST00000483066 311 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 COX7A2-208ENST00000509698 480 ntAPPRIS ALT2 TSL 3 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 HNRNPH1P3-201ENST00000515565 1225 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 LYPLA1-213ENST00000522007 250 ntTSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 SLN-203ENST00000531293 906 ntAPPRIS P1 TSL 4 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 FXYD5-208ENST00000543307 1003 ntTSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 MIR3185-201ENST00000583892 68 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 AC006504.5-206ENST00000585917 719 ntTSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 SNHG16-204ENST00000586942 568 ntTSL 4 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 TMEM147-AS1-204ENST00000590125 698 ntTSL 3 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 AC007780.1-204ENST00000592030 773 ntTSL 3 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 AC004149.1-201ENST00000593169 549 ntTSL 4 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 UBA52-207ENST00000596273 764 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 AL022326.2-201ENST00000623458 406 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 TAF1B-211ENST00000625239 273 ntTSL 5 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 AL353747.4-201ENST00000628362 582 ntTSL 3 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 FBXO18-202ENST00000379999 3702 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 RRP12-201ENST00000315563 4038 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 AP001020.3-201ENST00000583314 1714 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 TSPAN18-201ENST00000340160 4229 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 CELF1-203ENST00000361904 1580 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 ZNF691-208ENST00000630961 1581 ntTSL 3 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 HTR3B-201ENST00000260191 2011 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 MCF2-209ENST00000520602 3945 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 CASP7-205ENST00000369331 2380 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 RFX2-202ENST00000359161 3595 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 FGFR2-209ENST00000369056 2650 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 ZFYVE1-201ENST00000318876 4362 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 EDAR-202ENST00000376651 4303 ntTSL 2 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 RPS8-201ENST00000372209 685 ntTSL 2 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 SNRPC-203ENST00000374018 600 ntTSL 5 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 CYCSP55-201ENST00000399027 311 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 PTMA-203ENST00000409321 735 ntTSL 3 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AL512328.1-201ENST00000412344 536 ntTSL 3 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC024559.1-201ENST00000426616 566 ntTSL 4 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 RBM22P3-201ENST00000430648 954 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 FAM231A-201ENST00000434336 510 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC099794.2-201ENST00000435230 303 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 AL162724.1-201ENST00000437461 373 ntTSL 2 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AL354984.2-201ENST00000441277 1014 ntTSL 2 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC073346.1-201ENST00000441928 651 ntTSL 3 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 LINC00323-203ENST00000446910 580 ntTSL 3 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 DDX39A-203ENST00000454233 922 ntTSL 3 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC007318.1-201ENST00000467568 881 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC012339.1-201ENST00000505564 941 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC008453.1-201ENST00000511626 425 ntTSL 3 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC023078.2-201ENST00000527164 988 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC068987.3-202ENST00000567167 1027 ntTSL 5 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 STRADA-211ENST00000579340 1168 ntTSL 5 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 MIR3689B-201ENST00000581772 148 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 MIR4442-201ENST00000583412 67 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 HKR1-219ENST00000591134 547 ntTSL 2 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 CHCHD2P11-201ENST00000604283 457 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC117498.3-201ENST00000605409 511 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 AC009158.1-202ENST00000609586 242 ntTSL 5 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 MIR7847-201ENST00000610912 103 ntBASIC9.15□□□□□ -0.94
SNX18Q96RF0 FAM231C-201ENST00000624031 510 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 FOXCUT-201ENST00000628509 333 ntTSL 3 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 DAZ3-203ENST00000446723 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 DAZ2-209ENST00000449947 3372 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 ZNF691-205ENST00000372507 1683 ntAPPRIS P3 TSL 3 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 TRIM16-201ENST00000336708 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SNX18Q96RF0 LARP4-204ENST00000429001 4000 ntTSL 5 BASIC9.15□□□□□ -0.94
SNX18Q96RF0 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SNX18Q96RF0 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
SNX18Q96RF0 ADAMTS12-203ENST00000504830 8774 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms