Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 POM121L13P-201ENST00000422362 380 ntBASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 FAM197Y4-202ENST00000622692 608 ntBASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC35.02■■■■□ 3.2
BIVM-ERCC5R4GMW8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
BIVM-ERCC5R4GMW8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
BIVM-ERCC5R4GMW8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC35.01■■■■□ 3.19
BIVM-ERCC5R4GMW8 KRT18P68-201ENST00000392293 1000 ntBASIC35.01■■■■□ 3.19
BIVM-ERCC5R4GMW8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
BIVM-ERCC5R4GMW8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC35.01■■■■□ 3.19
BIVM-ERCC5R4GMW8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC35.01■■■■□ 3.19
BIVM-ERCC5R4GMW8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 OR2A1-AS1-207ENST00000486094 819 ntBASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 MIR4497-201ENST00000583208 89 ntBASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC35■■■■□ 3.19
BIVM-ERCC5R4GMW8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
BIVM-ERCC5R4GMW8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
BIVM-ERCC5R4GMW8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC34.99■■■■□ 3.19
BIVM-ERCC5R4GMW8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
BIVM-ERCC5R4GMW8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
BIVM-ERCC5R4GMW8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC34.99■■■■□ 3.19
BIVM-ERCC5R4GMW8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC34.99■■■■□ 3.19
BIVM-ERCC5R4GMW8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 AC012618.2-201ENST00000428058 849 ntBASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
BIVM-ERCC5R4GMW8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
BIVM-ERCC5R4GMW8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
BIVM-ERCC5R4GMW8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC34.97■■■■□ 3.19
BIVM-ERCC5R4GMW8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC34.97■■■■□ 3.19
BIVM-ERCC5R4GMW8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
BIVM-ERCC5R4GMW8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC34.97■■■■□ 3.19
BIVM-ERCC5R4GMW8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC34.96■■■■□ 3.19
BIVM-ERCC5R4GMW8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC34.96■■■■□ 3.19
BIVM-ERCC5R4GMW8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
BIVM-ERCC5R4GMW8 KRT17P3-201ENST00000420566 1262 ntBASIC34.96■■■■□ 3.19
BIVM-ERCC5R4GMW8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC34.96■■■■□ 3.19
BIVM-ERCC5R4GMW8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC34.96■■■■□ 3.19
BIVM-ERCC5R4GMW8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
BIVM-ERCC5R4GMW8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC34.96■■■■□ 3.19
BIVM-ERCC5R4GMW8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC34.95■■■■□ 3.19
BIVM-ERCC5R4GMW8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
BIVM-ERCC5R4GMW8 HES2-205ENST00000487437 968 ntTSL 3 BASIC34.95■■■■□ 3.18
BIVM-ERCC5R4GMW8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC34.95■■■■□ 3.18
BIVM-ERCC5R4GMW8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC34.94■■■■□ 3.18
BIVM-ERCC5R4GMW8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
BIVM-ERCC5R4GMW8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC34.93■■■■□ 3.18
BIVM-ERCC5R4GMW8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC34.93■■■■□ 3.18
BIVM-ERCC5R4GMW8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
BIVM-ERCC5R4GMW8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC34.93■■■■□ 3.18
BIVM-ERCC5R4GMW8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
BIVM-ERCC5R4GMW8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC34.93■■■■□ 3.18
BIVM-ERCC5R4GMW8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
BIVM-ERCC5R4GMW8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
BIVM-ERCC5R4GMW8 C1orf229-201ENST00000623686 2258 ntBASIC34.92■■■■□ 3.18
BIVM-ERCC5R4GMW8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC34.92■■■■□ 3.18
BIVM-ERCC5R4GMW8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
BIVM-ERCC5R4GMW8 MIR718-201ENST00000390190 70 ntBASIC34.92■■■■□ 3.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms