Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 MIR663A-201ENST00000385250 93 ntBASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 AC007375.3-201ENST00000600936 2314 ntBASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 AL049796.1-201ENST00000565336 1766 ntBASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HS3ST4Q9Y661 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 AL050303.2-201ENST00000619798 666 ntBASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HS3ST4Q9Y661 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 AL591742.1-201ENST00000604433 565 ntBASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.44■■□□□ 1.02
HS3ST4Q9Y661 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 CYP2T1P-201ENST00000432607 1285 ntBASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 AC006970.2-201ENST00000450065 779 ntBASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
HS3ST4Q9Y661 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HS3ST4Q9Y661 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 AC016405.3-201ENST00000607710 860 ntBASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HS3ST4Q9Y661 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
HS3ST4Q9Y661 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.4■■□□□ 1.02
HS3ST4Q9Y661 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HS3ST4Q9Y661 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HS3ST4Q9Y661 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.4■■□□□ 1.02
HS3ST4Q9Y661 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms