Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 AC091799.1-201ENST00000422823 811 ntBASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 CYP2T1P-201ENST00000432607 1285 ntBASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 NCF1B-203ENST00000435988 1254 ntBASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 AL591742.1-201ENST00000604433 565 ntBASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.29■■□□□ 1.16
SNX9Q9Y5X1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 HLA-L-209ENST00000420110 1011 ntBASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SNX9Q9Y5X1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.27■■□□□ 1.16
SNX9Q9Y5X1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.27■■□□□ 1.15
SNX9Q9Y5X1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.27■■□□□ 1.15
SNX9Q9Y5X1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 GPX1P1-201ENST00000388829 606 ntBASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 AC083906.2-201ENST00000511578 360 ntBASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 AL121832.2-201ENST00000610979 668 ntBASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SNX9Q9Y5X1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SNX9Q9Y5X1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 AC133552.2-202ENST00000575694 574 ntBASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 AC016405.3-201ENST00000607710 860 ntBASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 AL109923.1-201ENST00000618799 583 ntBASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 AC008694.1-202ENST00000636953 945 ntBASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 AL024507.2-201ENST00000606070 2574 ntBASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SNX9Q9Y5X1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 AF201337.1-201ENST00000520239 748 ntBASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 AL162412.1-201ENST00000567129 965 ntBASIC22.23■■□□□ 1.15
SNX9Q9Y5X1 AC105036.2-201ENST00000569468 176 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms