Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHA9Q9Y5H5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHA9Q9Y5H5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA9Q9Y5H5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
PCDHA9Q9Y5H5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
PCDHA9Q9Y5H5 LINC02228-203ENST00000641970 1355 ntBASIC19.95■□□□□ 0.79
PCDHA9Q9Y5H5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 AC123595.1-201ENST00000440769 1046 ntBASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHA9Q9Y5H5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 EEF1DP3-203ENST00000566025 782 ntBASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA9Q9Y5H5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms