Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC066615.1-201ENST00000640911 628 ntBASIC20.14■□□□□ 0.81
PCDHGA3Q9Y5H0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDHGA3Q9Y5H0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA3Q9Y5H0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA3Q9Y5H0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA3Q9Y5H0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA3Q9Y5H0 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA3Q9Y5H0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA3Q9Y5H0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 AC139530.1-201ENST00000575312 1977 ntBASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 C11orf96-202ENST00000528572 1834 ntBASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 AC092118.2-201ENST00000613495 667 ntBASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA3Q9Y5H0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA3Q9Y5H0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 AL162412.1-201ENST00000567129 965 ntBASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 KRT16P2-201ENST00000414673 1423 ntBASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms