Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 SLC29A4P2-201ENST00000504749 1089 ntBASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SHANK2Q9UPX8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
SHANK2Q9UPX8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC31.18■■■□□ 2.58
SHANK2Q9UPX8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SHANK2Q9UPX8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC31.18■■■□□ 2.58
SHANK2Q9UPX8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SHANK2Q9UPX8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SHANK2Q9UPX8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
SHANK2Q9UPX8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SHANK2Q9UPX8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SHANK2Q9UPX8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SHANK2Q9UPX8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC31.17■■■□□ 2.58
SHANK2Q9UPX8 AL158047.1-201ENST00000445918 881 ntBASIC31.17■■■□□ 2.58
SHANK2Q9UPX8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
SHANK2Q9UPX8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC31.17■■■□□ 2.58
SHANK2Q9UPX8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
SHANK2Q9UPX8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SHANK2Q9UPX8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SHANK2Q9UPX8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SHANK2Q9UPX8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SHANK2Q9UPX8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
SHANK2Q9UPX8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SHANK2Q9UPX8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC31.16■■■□□ 2.58
SHANK2Q9UPX8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC31.16■■■□□ 2.58
SHANK2Q9UPX8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
SHANK2Q9UPX8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 KRT18P68-201ENST00000392293 1000 ntBASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SHANK2Q9UPX8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SHANK2Q9UPX8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SHANK2Q9UPX8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC31.14■■■□□ 2.58
SHANK2Q9UPX8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC31.14■■■□□ 2.58
SHANK2Q9UPX8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC31.14■■■□□ 2.58
SHANK2Q9UPX8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
SHANK2Q9UPX8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SHANK2Q9UPX8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
SHANK2Q9UPX8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC31.14■■■□□ 2.57
SHANK2Q9UPX8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC31.14■■■□□ 2.57
SHANK2Q9UPX8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.57
SHANK2Q9UPX8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC31.13■■■□□ 2.57
SHANK2Q9UPX8 AC116050.2-201ENST00000612102 1779 ntBASIC31.13■■■□□ 2.57
SHANK2Q9UPX8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SHANK2Q9UPX8 GOLGA2P6-201ENST00000340929 2049 ntBASIC31.13■■■□□ 2.57
SHANK2Q9UPX8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.13■■■□□ 2.57
SHANK2Q9UPX8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SHANK2Q9UPX8 AC142381.4-202ENST00000563973 229 ntBASIC31.13■■■□□ 2.57
SHANK2Q9UPX8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC31.13■■■□□ 2.57
SHANK2Q9UPX8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SHANK2Q9UPX8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
SHANK2Q9UPX8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 AC092368.3-202ENST00000574180 1591 ntBASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 AC069544.1-201ENST00000609399 999 ntBASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC31.11■■■□□ 2.57
SHANK2Q9UPX8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 MIR1224-201ENST00000408193 85 ntBASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC31.1■■■□□ 2.57
SHANK2Q9UPX8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms