Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 AL136162.1-201ENST00000607711 1078 ntBASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB4Q9UN71 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 AC087289.5-201ENST00000586076 3175 ntBASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB4Q9UN71 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PCDHGB4Q9UN71 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 AP006587.3-201ENST00000525742 1516 ntBASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 AC024257.2-201ENST00000549699 147 ntBASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB4Q9UN71 AC135279.3-201ENST00000610945 1311 ntBASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 SMUG1P1-201ENST00000590640 811 ntBASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 AC008406.3-201ENST00000620001 1374 ntBASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB4Q9UN71 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PCDHGB4Q9UN71 AL020996.1-203ENST00000536896 2307 ntBASIC20.02■□□□□ 0.79
PCDHGB4Q9UN71 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGB4Q9UN71 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGB4Q9UN71 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGB4Q9UN71 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB4Q9UN71 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms