Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
MLH3Q9UHC1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
MLH3Q9UHC1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
MLH3Q9UHC1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
MLH3Q9UHC1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
MLH3Q9UHC1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
MLH3Q9UHC1 AC113410.3-201ENST00000623366 203 ntBASIC31.27■■■□□ 2.6
MLH3Q9UHC1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
MLH3Q9UHC1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC31.26■■■□□ 2.6
MLH3Q9UHC1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
MLH3Q9UHC1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
MLH3Q9UHC1 C11orf96-202ENST00000528572 1834 ntBASIC31.26■■■□□ 2.59
MLH3Q9UHC1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
MLH3Q9UHC1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
MLH3Q9UHC1 MIR4785-201ENST00000585005 73 ntBASIC31.26■■■□□ 2.59
MLH3Q9UHC1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC31.26■■■□□ 2.59
MLH3Q9UHC1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
MLH3Q9UHC1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
MLH3Q9UHC1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
MLH3Q9UHC1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
MLH3Q9UHC1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
MLH3Q9UHC1 TSPY15P-201ENST00000457163 923 ntBASIC31.24■■■□□ 2.59
MLH3Q9UHC1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.24■■■□□ 2.59
MLH3Q9UHC1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
MLH3Q9UHC1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
MLH3Q9UHC1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
MLH3Q9UHC1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
MLH3Q9UHC1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
MLH3Q9UHC1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC31.23■■■□□ 2.59
MLH3Q9UHC1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
MLH3Q9UHC1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.23■■■□□ 2.59
MLH3Q9UHC1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC31.23■■■□□ 2.59
MLH3Q9UHC1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
MLH3Q9UHC1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
MLH3Q9UHC1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
MLH3Q9UHC1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
MLH3Q9UHC1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
MLH3Q9UHC1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
MLH3Q9UHC1 AL355075.4-201ENST00000554988 638 ntBASIC31.22■■■□□ 2.59
MLH3Q9UHC1 TK2-213ENST00000563369 882 ntTSL 5 BASIC31.22■■■□□ 2.59
MLH3Q9UHC1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
MLH3Q9UHC1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
MLH3Q9UHC1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
MLH3Q9UHC1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
MLH3Q9UHC1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.22■■■□□ 2.59
MLH3Q9UHC1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 AC239809.2-201ENST00000415381 517 ntBASIC31.21■■■□□ 2.59
MLH3Q9UHC1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 AL135905.2-201ENST00000584934 1404 ntBASIC31.21■■■□□ 2.59
MLH3Q9UHC1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC31.21■■■□□ 2.59
MLH3Q9UHC1 AC133561.5-201ENST00000635547 218 ntBASIC31.21■■■□□ 2.59
MLH3Q9UHC1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
MLH3Q9UHC1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
MLH3Q9UHC1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.2■■■□□ 2.58
MLH3Q9UHC1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
MLH3Q9UHC1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
MLH3Q9UHC1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
MLH3Q9UHC1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
MLH3Q9UHC1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
MLH3Q9UHC1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
MLH3Q9UHC1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
MLH3Q9UHC1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
MLH3Q9UHC1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC31.19■■■□□ 2.58
MLH3Q9UHC1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC31.19■■■□□ 2.58
MLH3Q9UHC1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms