Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 AC018445.3-201ENST00000624177 1945 ntBASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 RARRES2P2-201ENST00000394842 485 ntBASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 AC007225.1-201ENST00000566331 1836 ntBASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 AL512408.1-201ENST00000569378 2000 ntBASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD3Q9UBI1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 AC121338.2-201ENST00000622535 1744 ntBASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.24■□□□□ 0.51
COMMD3Q9UBI1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 AC137630.3-201ENST00000607245 391 ntBASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD3Q9UBI1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 AC098818.2-201ENST00000564925 2320 ntBASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 AL162377.1-201ENST00000618844 1793 ntBASIC18.22■□□□□ 0.51
COMMD3Q9UBI1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 AC099778.1-201ENST00000568593 1911 ntBASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms