Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.65■□□□□ 0.74
VAPAQ9P0L0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VAPAQ9P0L0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VAPAQ9P0L0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.64■□□□□ 0.74
VAPAQ9P0L0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.64■□□□□ 0.74
VAPAQ9P0L0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VAPAQ9P0L0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 AC105233.4-201ENST00000642045 216 ntBASIC19.64■□□□□ 0.73
VAPAQ9P0L0 AC135279.3-201ENST00000610945 1311 ntBASIC19.64■□□□□ 0.73
VAPAQ9P0L0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 FP700111.2-201ENST00000619190 1892 ntBASIC19.64■□□□□ 0.73
VAPAQ9P0L0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VAPAQ9P0L0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.63■□□□□ 0.73
VAPAQ9P0L0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 AC008764.7-201ENST00000593779 1081 ntBASIC19.62■□□□□ 0.73
VAPAQ9P0L0 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VAPAQ9P0L0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 AL512408.1-201ENST00000569378 2000 ntBASIC19.61■□□□□ 0.73
VAPAQ9P0L0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 AC112907.3-201ENST00000577781 2400 ntBASIC19.61■□□□□ 0.73
VAPAQ9P0L0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 TSPY26P-201ENST00000476365 1326 ntBASIC19.61■□□□□ 0.73
VAPAQ9P0L0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 AC099791.1-201ENST00000416440 715 ntBASIC19.61■□□□□ 0.73
VAPAQ9P0L0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.61■□□□□ 0.73
VAPAQ9P0L0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms