Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
BLOC1S4Q9NUP1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 AC245052.3-201ENST00000450182 901 ntBASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 AC243732.1-201ENST00000612648 864 ntBASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BLOC1S4Q9NUP1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 AC006015.1-201ENST00000429970 570 ntBASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 AC137761.2-201ENST00000561729 223 ntBASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 AC145350.3-201ENST00000569033 163 ntBASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.17■■□□□ 1.3
BLOC1S4Q9NUP1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.16■■□□□ 1.3
BLOC1S4Q9NUP1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BLOC1S4Q9NUP1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
BLOC1S4Q9NUP1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BLOC1S4Q9NUP1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
BLOC1S4Q9NUP1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BLOC1S4Q9NUP1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BLOC1S4Q9NUP1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.16■■□□□ 1.3
BLOC1S4Q9NUP1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 AC091799.1-201ENST00000422823 811 ntBASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 AC006128.1-201ENST00000624704 1661 ntBASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BLOC1S4Q9NUP1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
BLOC1S4Q9NUP1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
BLOC1S4Q9NUP1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
BLOC1S4Q9NUP1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.14■■□□□ 1.29
BLOC1S4Q9NUP1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.14■■□□□ 1.29
BLOC1S4Q9NUP1 AC022517.1-201ENST00000592429 346 ntBASIC23.14■■□□□ 1.29
BLOC1S4Q9NUP1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BLOC1S4Q9NUP1 AC011484.1-201ENST00000377652 1995 ntBASIC23.14■■□□□ 1.29
BLOC1S4Q9NUP1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 MFSD11-216ENST00000590393 1141 ntBASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BLOC1S4Q9NUP1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BLOC1S4Q9NUP1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
BLOC1S4Q9NUP1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.12■■□□□ 1.29
BLOC1S4Q9NUP1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.12■■□□□ 1.29
BLOC1S4Q9NUP1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
BLOC1S4Q9NUP1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BLOC1S4Q9NUP1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
BLOC1S4Q9NUP1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.12■■□□□ 1.29
BLOC1S4Q9NUP1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms